Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clcf1Q9QZM3 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clcf1Q9QZM3 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clcf1Q9QZM3 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Clcf1Q9QZM3 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clcf1Q9QZM3 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clcf1Q9QZM3 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clcf1Q9QZM3 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.89□□□□□ -0.19
Clcf1Q9QZM3 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clcf1Q9QZM3 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.89□□□□□ -0.19
Clcf1Q9QZM3 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clcf1Q9QZM3 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clcf1Q9QZM3 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clcf1Q9QZM3 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clcf1Q9QZM3 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Clcf1Q9QZM3 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clcf1Q9QZM3 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clcf1Q9QZM3 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.88□□□□□ -0.19
Clcf1Q9QZM3 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Clcf1Q9QZM3 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.88□□□□□ -0.19
Clcf1Q9QZM3 Gm27628-201ENSMUST00000184911 107 ntBASIC13.88□□□□□ -0.19
Clcf1Q9QZM3 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.88□□□□□ -0.19
Clcf1Q9QZM3 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.88□□□□□ -0.19
Clcf1Q9QZM3 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.88□□□□□ -0.19
Clcf1Q9QZM3 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clcf1Q9QZM3 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clcf1Q9QZM3 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clcf1Q9QZM3 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clcf1Q9QZM3 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clcf1Q9QZM3 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clcf1Q9QZM3 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.88□□□□□ -0.19
Clcf1Q9QZM3 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Clcf1Q9QZM3 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.88□□□□□ -0.19
Clcf1Q9QZM3 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clcf1Q9QZM3 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clcf1Q9QZM3 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clcf1Q9QZM3 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
Clcf1Q9QZM3 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Clcf1Q9QZM3 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clcf1Q9QZM3 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clcf1Q9QZM3 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clcf1Q9QZM3 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.87□□□□□ -0.19
Clcf1Q9QZM3 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clcf1Q9QZM3 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clcf1Q9QZM3 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Clcf1Q9QZM3 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clcf1Q9QZM3 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Clcf1Q9QZM3 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clcf1Q9QZM3 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.87□□□□□ -0.19
Clcf1Q9QZM3 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Clcf1Q9QZM3 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clcf1Q9QZM3 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clcf1Q9QZM3 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clcf1Q9QZM3 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Clcf1Q9QZM3 Gm11764-201ENSMUST00000120221 623 ntBASIC13.87□□□□□ -0.19
Clcf1Q9QZM3 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clcf1Q9QZM3 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.87□□□□□ -0.19
Clcf1Q9QZM3 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clcf1Q9QZM3 Gm2308-201ENSMUST00000166539 1004 ntBASIC13.87□□□□□ -0.19
Clcf1Q9QZM3 Gm5682-201ENSMUST00000173402 505 ntBASIC13.87□□□□□ -0.19
Clcf1Q9QZM3 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC13.87□□□□□ -0.19
Clcf1Q9QZM3 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clcf1Q9QZM3 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Clcf1Q9QZM3 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.87□□□□□ -0.19
Clcf1Q9QZM3 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.87□□□□□ -0.19
Clcf1Q9QZM3 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Clcf1Q9QZM3 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clcf1Q9QZM3 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clcf1Q9QZM3 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clcf1Q9QZM3 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clcf1Q9QZM3 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clcf1Q9QZM3 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clcf1Q9QZM3 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clcf1Q9QZM3 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.87□□□□□ -0.19
Clcf1Q9QZM3 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC13.87□□□□□ -0.19
Clcf1Q9QZM3 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Clcf1Q9QZM3 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clcf1Q9QZM3 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Clcf1Q9QZM3 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clcf1Q9QZM3 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clcf1Q9QZM3 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Clcf1Q9QZM3 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Clcf1Q9QZM3 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clcf1Q9QZM3 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC13.86□□□□□ -0.19
Clcf1Q9QZM3 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clcf1Q9QZM3 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clcf1Q9QZM3 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC13.86□□□□□ -0.19
Clcf1Q9QZM3 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Clcf1Q9QZM3 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clcf1Q9QZM3 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.86□□□□□ -0.19
Clcf1Q9QZM3 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.86□□□□□ -0.19
Clcf1Q9QZM3 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clcf1Q9QZM3 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clcf1Q9QZM3 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.86□□□□□ -0.19
Clcf1Q9QZM3 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Clcf1Q9QZM3 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clcf1Q9QZM3 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clcf1Q9QZM3 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clcf1Q9QZM3 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clcf1Q9QZM3 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms