Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Shroom3Q9QXN0 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.29■□□□□ 0.04
Shroom3Q9QXN0 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shroom3Q9QXN0 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Shroom3Q9QXN0 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Shroom3Q9QXN0 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.29■□□□□ 0.04
Shroom3Q9QXN0 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shroom3Q9QXN0 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.29■□□□□ 0.04
Shroom3Q9QXN0 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shroom3Q9QXN0 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Shroom3Q9QXN0 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.29■□□□□ 0.04
Shroom3Q9QXN0 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Shroom3Q9QXN0 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shroom3Q9QXN0 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Shroom3Q9QXN0 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.29■□□□□ 0.04
Shroom3Q9QXN0 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shroom3Q9QXN0 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shroom3Q9QXN0 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.28■□□□□ 0.04
Shroom3Q9QXN0 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.28■□□□□ 0.04
Shroom3Q9QXN0 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Shroom3Q9QXN0 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shroom3Q9QXN0 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.28■□□□□ 0.04
Shroom3Q9QXN0 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shroom3Q9QXN0 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shroom3Q9QXN0 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shroom3Q9QXN0 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shroom3Q9QXN0 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.28■□□□□ 0.04
Shroom3Q9QXN0 Gm37153-201ENSMUST00000193637 231 ntBASIC15.28■□□□□ 0.04
Shroom3Q9QXN0 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC15.28■□□□□ 0.04
Shroom3Q9QXN0 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.28■□□□□ 0.04
Shroom3Q9QXN0 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shroom3Q9QXN0 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shroom3Q9QXN0 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Shroom3Q9QXN0 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shroom3Q9QXN0 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shroom3Q9QXN0 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shroom3Q9QXN0 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shroom3Q9QXN0 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Shroom3Q9QXN0 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shroom3Q9QXN0 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shroom3Q9QXN0 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shroom3Q9QXN0 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shroom3Q9QXN0 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shroom3Q9QXN0 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shroom3Q9QXN0 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shroom3Q9QXN0 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shroom3Q9QXN0 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Shroom3Q9QXN0 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shroom3Q9QXN0 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.27■□□□□ 0.04
Shroom3Q9QXN0 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Shroom3Q9QXN0 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Shroom3Q9QXN0 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.04
Shroom3Q9QXN0 Gm4913-201ENSMUST00000117075 1290 ntBASIC15.27■□□□□ 0.04
Shroom3Q9QXN0 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.27■□□□□ 0.04
Shroom3Q9QXN0 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.27■□□□□ 0.04
Shroom3Q9QXN0 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Shroom3Q9QXN0 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Shroom3Q9QXN0 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Shroom3Q9QXN0 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Shroom3Q9QXN0 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Shroom3Q9QXN0 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Shroom3Q9QXN0 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Shroom3Q9QXN0 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Shroom3Q9QXN0 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.27■□□□□ 0.03
Shroom3Q9QXN0 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Shroom3Q9QXN0 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Shroom3Q9QXN0 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Shroom3Q9QXN0 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Shroom3Q9QXN0 Gm10499-201ENSMUST00000174094 934 ntBASIC15.27■□□□□ 0.03
Shroom3Q9QXN0 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC15.27■□□□□ 0.03
Shroom3Q9QXN0 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.27■□□□□ 0.03
Shroom3Q9QXN0 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.27■□□□□ 0.03
Shroom3Q9QXN0 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Shroom3Q9QXN0 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Shroom3Q9QXN0 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Shroom3Q9QXN0 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Shroom3Q9QXN0 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Shroom3Q9QXN0 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Shroom3Q9QXN0 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Shroom3Q9QXN0 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Shroom3Q9QXN0 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Shroom3Q9QXN0 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Shroom3Q9QXN0 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Shroom3Q9QXN0 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shroom3Q9QXN0 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shroom3Q9QXN0 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.26■□□□□ 0.03
Shroom3Q9QXN0 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shroom3Q9QXN0 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shroom3Q9QXN0 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.26■□□□□ 0.03
Shroom3Q9QXN0 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Shroom3Q9QXN0 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shroom3Q9QXN0 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shroom3Q9QXN0 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shroom3Q9QXN0 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shroom3Q9QXN0 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shroom3Q9QXN0 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shroom3Q9QXN0 Gm7787-201ENSMUST00000216858 688 ntBASIC15.26■□□□□ 0.03
Shroom3Q9QXN0 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shroom3Q9QXN0 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shroom3Q9QXN0 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms