Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sec61a2Q9JLR1 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sec61a2Q9JLR1 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sec61a2Q9JLR1 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sec61a2Q9JLR1 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.79□□□□□ -0.2
Sec61a2Q9JLR1 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sec61a2Q9JLR1 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sec61a2Q9JLR1 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sec61a2Q9JLR1 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.79□□□□□ -0.2
Sec61a2Q9JLR1 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sec61a2Q9JLR1 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sec61a2Q9JLR1 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sec61a2Q9JLR1 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Sec61a2Q9JLR1 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Sec61a2Q9JLR1 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sec61a2Q9JLR1 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sec61a2Q9JLR1 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sec61a2Q9JLR1 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Sec61a2Q9JLR1 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.78□□□□□ -0.2
Sec61a2Q9JLR1 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC13.78□□□□□ -0.2
Sec61a2Q9JLR1 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.78□□□□□ -0.2
Sec61a2Q9JLR1 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sec61a2Q9JLR1 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Sec61a2Q9JLR1 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sec61a2Q9JLR1 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sec61a2Q9JLR1 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sec61a2Q9JLR1 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sec61a2Q9JLR1 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sec61a2Q9JLR1 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
Sec61a2Q9JLR1 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sec61a2Q9JLR1 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sec61a2Q9JLR1 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sec61a2Q9JLR1 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sec61a2Q9JLR1 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sec61a2Q9JLR1 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Sec61a2Q9JLR1 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.2
Sec61a2Q9JLR1 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Sec61a2Q9JLR1 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Sec61a2Q9JLR1 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Sec61a2Q9JLR1 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sec61a2Q9JLR1 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sec61a2Q9JLR1 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sec61a2Q9JLR1 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.77□□□□□ -0.21
Sec61a2Q9JLR1 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.77□□□□□ -0.21
Sec61a2Q9JLR1 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sec61a2Q9JLR1 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sec61a2Q9JLR1 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.77□□□□□ -0.21
Sec61a2Q9JLR1 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Sec61a2Q9JLR1 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.77□□□□□ -0.21
Sec61a2Q9JLR1 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sec61a2Q9JLR1 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sec61a2Q9JLR1 AC159301.1-201ENSMUST00000225130 1182 ntBASIC13.77□□□□□ -0.21
Sec61a2Q9JLR1 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sec61a2Q9JLR1 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sec61a2Q9JLR1 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sec61a2Q9JLR1 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sec61a2Q9JLR1 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sec61a2Q9JLR1 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Sec61a2Q9JLR1 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sec61a2Q9JLR1 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Sec61a2Q9JLR1 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sec61a2Q9JLR1 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sec61a2Q9JLR1 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sec61a2Q9JLR1 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Sec61a2Q9JLR1 Grk6-207ENSMUST00000225925 2769 ntBASIC13.77□□□□□ -0.21
Sec61a2Q9JLR1 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sec61a2Q9JLR1 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sec61a2Q9JLR1 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sec61a2Q9JLR1 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Sec61a2Q9JLR1 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sec61a2Q9JLR1 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sec61a2Q9JLR1 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sec61a2Q9JLR1 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sec61a2Q9JLR1 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sec61a2Q9JLR1 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sec61a2Q9JLR1 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sec61a2Q9JLR1 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sec61a2Q9JLR1 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sec61a2Q9JLR1 Gm8784-201ENSMUST00000222096 1435 ntBASIC13.76□□□□□ -0.21
Sec61a2Q9JLR1 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sec61a2Q9JLR1 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sec61a2Q9JLR1 Gm4459-201ENSMUST00000118750 468 ntBASIC13.76□□□□□ -0.21
Sec61a2Q9JLR1 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sec61a2Q9JLR1 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC13.76□□□□□ -0.21
Sec61a2Q9JLR1 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC13.76□□□□□ -0.21
Sec61a2Q9JLR1 Gm44357-201ENSMUST00000195897 142 ntBASIC13.76□□□□□ -0.21
Sec61a2Q9JLR1 Gm19658-201ENSMUST00000196231 138 ntBASIC13.76□□□□□ -0.21
Sec61a2Q9JLR1 Gm44367-201ENSMUST00000196836 138 ntBASIC13.76□□□□□ -0.21
Sec61a2Q9JLR1 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.76□□□□□ -0.21
Sec61a2Q9JLR1 Gm44350-201ENSMUST00000197197 138 ntBASIC13.76□□□□□ -0.21
Sec61a2Q9JLR1 Gm44390-201ENSMUST00000197533 144 ntBASIC13.76□□□□□ -0.21
Sec61a2Q9JLR1 Gm44313-201ENSMUST00000198018 138 ntBASIC13.76□□□□□ -0.21
Sec61a2Q9JLR1 Gm44486-201ENSMUST00000198508 138 ntBASIC13.76□□□□□ -0.21
Sec61a2Q9JLR1 Gm44314-201ENSMUST00000199263 138 ntBASIC13.76□□□□□ -0.21
Sec61a2Q9JLR1 Gm44394-201ENSMUST00000199558 138 ntBASIC13.76□□□□□ -0.21
Sec61a2Q9JLR1 Gm44484-201ENSMUST00000199873 138 ntBASIC13.76□□□□□ -0.21
Sec61a2Q9JLR1 Gm44466-201ENSMUST00000200264 138 ntBASIC13.76□□□□□ -0.21
Sec61a2Q9JLR1 Gm44359-201ENSMUST00000200671 138 ntBASIC13.76□□□□□ -0.21
Sec61a2Q9JLR1 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.76□□□□□ -0.21
Sec61a2Q9JLR1 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms