Protein–RNA interactions for Protein: Q9JKS4

Ldb3, LIM domain-binding protein 3, mousemouse

Known RBP Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3Q9JKS4 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ldb3Q9JKS4 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ldb3Q9JKS4 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ldb3Q9JKS4 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ldb3Q9JKS4 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
Ldb3Q9JKS4 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ldb3Q9JKS4 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.84□□□□□ -0.19
Ldb3Q9JKS4 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ldb3Q9JKS4 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ldb3Q9JKS4 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
Ldb3Q9JKS4 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ldb3Q9JKS4 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ldb3Q9JKS4 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ldb3Q9JKS4 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ldb3Q9JKS4 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.84□□□□□ -0.19
Ldb3Q9JKS4 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Ldb3Q9JKS4 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ldb3Q9JKS4 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.84□□□□□ -0.19
Ldb3Q9JKS4 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.84□□□□□ -0.19
Ldb3Q9JKS4 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.84□□□□□ -0.19
Ldb3Q9JKS4 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ldb3Q9JKS4 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ldb3Q9JKS4 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ldb3Q9JKS4 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ldb3Q9JKS4 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.84□□□□□ -0.19
Ldb3Q9JKS4 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ldb3Q9JKS4 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ldb3Q9JKS4 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ldb3Q9JKS4 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ldb3Q9JKS4 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC13.84□□□□□ -0.19
Ldb3Q9JKS4 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ldb3Q9JKS4 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ldb3Q9JKS4 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ldb3Q9JKS4 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Ldb3Q9JKS4 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Ldb3Q9JKS4 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.83□□□□□ -0.19
Ldb3Q9JKS4 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ldb3Q9JKS4 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ldb3Q9JKS4 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ldb3Q9JKS4 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Ldb3Q9JKS4 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.83□□□□□ -0.2
Ldb3Q9JKS4 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ldb3Q9JKS4 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Ldb3Q9JKS4 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ldb3Q9JKS4 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ldb3Q9JKS4 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ldb3Q9JKS4 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ldb3Q9JKS4 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ldb3Q9JKS4 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.83□□□□□ -0.2
Ldb3Q9JKS4 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ldb3Q9JKS4 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ldb3Q9JKS4 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ldb3Q9JKS4 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ldb3Q9JKS4 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Ldb3Q9JKS4 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ldb3Q9JKS4 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ldb3Q9JKS4 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ldb3Q9JKS4 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ldb3Q9JKS4 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ldb3Q9JKS4 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.83□□□□□ -0.2
Ldb3Q9JKS4 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ldb3Q9JKS4 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ldb3Q9JKS4 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ldb3Q9JKS4 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ldb3Q9JKS4 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.82□□□□□ -0.2
Ldb3Q9JKS4 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ldb3Q9JKS4 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ldb3Q9JKS4 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ldb3Q9JKS4 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.82□□□□□ -0.2
Ldb3Q9JKS4 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ldb3Q9JKS4 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.82□□□□□ -0.2
Ldb3Q9JKS4 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC13.82□□□□□ -0.2
Ldb3Q9JKS4 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.82□□□□□ -0.2
Ldb3Q9JKS4 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ldb3Q9JKS4 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ldb3Q9JKS4 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ldb3Q9JKS4 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ldb3Q9JKS4 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ldb3Q9JKS4 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ldb3Q9JKS4 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ldb3Q9JKS4 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ldb3Q9JKS4 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ldb3Q9JKS4 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ldb3Q9JKS4 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ldb3Q9JKS4 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.81□□□□□ -0.2
Ldb3Q9JKS4 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.81□□□□□ -0.2
Ldb3Q9JKS4 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ldb3Q9JKS4 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Ldb3Q9JKS4 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ldb3Q9JKS4 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ldb3Q9JKS4 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ldb3Q9JKS4 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ldb3Q9JKS4 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Ldb3Q9JKS4 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.81□□□□□ -0.2
Ldb3Q9JKS4 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ldb3Q9JKS4 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ldb3Q9JKS4 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC13.81□□□□□ -0.2
Ldb3Q9JKS4 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC13.81□□□□□ -0.2
Ldb3Q9JKS4 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ldb3Q9JKS4 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms