Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Gm5745-201ENSMUST00000183748 313 ntBASIC17.18■□□□□ 0.34
Cacna1fQ9JIS7 Gm45098-201ENSMUST00000207179 657 ntBASIC17.18■□□□□ 0.34
Cacna1fQ9JIS7 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC17.18■□□□□ 0.34
Cacna1fQ9JIS7 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cacna1fQ9JIS7 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cacna1fQ9JIS7 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cacna1fQ9JIS7 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cacna1fQ9JIS7 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cacna1fQ9JIS7 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.17■□□□□ 0.34
Cacna1fQ9JIS7 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Cacna1fQ9JIS7 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Cacna1fQ9JIS7 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC17.17■□□□□ 0.34
Cacna1fQ9JIS7 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Cacna1fQ9JIS7 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cacna1fQ9JIS7 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cacna1fQ9JIS7 AC124732.1-201ENSMUST00000221551 910 ntBASIC17.17■□□□□ 0.34
Cacna1fQ9JIS7 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cacna1fQ9JIS7 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cacna1fQ9JIS7 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Cacna1fQ9JIS7 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.17■□□□□ 0.34
Cacna1fQ9JIS7 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC17.17■□□□□ 0.34
Cacna1fQ9JIS7 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Cacna1fQ9JIS7 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cacna1fQ9JIS7 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cacna1fQ9JIS7 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cacna1fQ9JIS7 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cacna1fQ9JIS7 Gm12490-201ENSMUST00000120255 560 ntBASIC17.17■□□□□ 0.34
Cacna1fQ9JIS7 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC17.17■□□□□ 0.34
Cacna1fQ9JIS7 Gm29667-201ENSMUST00000190817 490 ntBASIC17.17■□□□□ 0.34
Cacna1fQ9JIS7 Shd-206ENSMUST00000225145 998 ntBASIC17.17■□□□□ 0.34
Cacna1fQ9JIS7 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cacna1fQ9JIS7 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cacna1fQ9JIS7 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC17.16■□□□□ 0.34
Cacna1fQ9JIS7 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cacna1fQ9JIS7 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cacna1fQ9JIS7 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cacna1fQ9JIS7 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cacna1fQ9JIS7 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cacna1fQ9JIS7 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC17.16■□□□□ 0.34
Cacna1fQ9JIS7 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cacna1fQ9JIS7 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Cacna1fQ9JIS7 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cacna1fQ9JIS7 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Cacna1fQ9JIS7 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cacna1fQ9JIS7 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cacna1fQ9JIS7 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cacna1fQ9JIS7 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cacna1fQ9JIS7 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC17.16■□□□□ 0.34
Cacna1fQ9JIS7 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Cacna1fQ9JIS7 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cacna1fQ9JIS7 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cacna1fQ9JIS7 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cacna1fQ9JIS7 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cacna1fQ9JIS7 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cacna1fQ9JIS7 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cacna1fQ9JIS7 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cacna1fQ9JIS7 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cacna1fQ9JIS7 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.15■□□□□ 0.34
Cacna1fQ9JIS7 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cacna1fQ9JIS7 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC17.15■□□□□ 0.34
Cacna1fQ9JIS7 AC090659.2-201ENSMUST00000225378 1186 ntBASIC17.15■□□□□ 0.34
Cacna1fQ9JIS7 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cacna1fQ9JIS7 Gm10313-201ENSMUST00000095320 1002 ntBASIC17.15■□□□□ 0.34
Cacna1fQ9JIS7 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Cacna1fQ9JIS7 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Cacna1fQ9JIS7 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cacna1fQ9JIS7 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cacna1fQ9JIS7 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC17.15■□□□□ 0.34
Cacna1fQ9JIS7 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cacna1fQ9JIS7 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cacna1fQ9JIS7 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cacna1fQ9JIS7 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cacna1fQ9JIS7 Gm16215-201ENSMUST00000161990 637 ntBASIC17.15■□□□□ 0.34
Cacna1fQ9JIS7 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cacna1fQ9JIS7 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC17.15■□□□□ 0.34
Cacna1fQ9JIS7 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC17.15■□□□□ 0.34
Cacna1fQ9JIS7 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cacna1fQ9JIS7 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cacna1fQ9JIS7 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cacna1fQ9JIS7 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cacna1fQ9JIS7 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cacna1fQ9JIS7 Tfap2a-203ENSMUST00000223869 2037 ntBASIC17.14■□□□□ 0.33
Cacna1fQ9JIS7 Gm4875-201ENSMUST00000118257 786 ntBASIC17.14■□□□□ 0.33
Cacna1fQ9JIS7 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC17.14■□□□□ 0.33
Cacna1fQ9JIS7 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cacna1fQ9JIS7 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC17.14■□□□□ 0.33
Cacna1fQ9JIS7 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cacna1fQ9JIS7 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.14■□□□□ 0.33
Cacna1fQ9JIS7 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cacna1fQ9JIS7 Dancr-204ENSMUST00000132389 2347 ntBASIC17.14■□□□□ 0.33
Cacna1fQ9JIS7 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cacna1fQ9JIS7 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacna1fQ9JIS7 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC17.13■□□□□ 0.33
Cacna1fQ9JIS7 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC17.13■□□□□ 0.33
Cacna1fQ9JIS7 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC17.13■□□□□ 0.33
Cacna1fQ9JIS7 AC130829.1-201ENSMUST00000221548 494 ntBASIC17.13■□□□□ 0.33
Cacna1fQ9JIS7 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacna1fQ9JIS7 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacna1fQ9JIS7 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cacna1fQ9JIS7 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms