Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.31□□□□□ -0.44
Smco4Q9JIS3 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Smco4Q9JIS3 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smco4Q9JIS3 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smco4Q9JIS3 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smco4Q9JIS3 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smco4Q9JIS3 Gm5408-201ENSMUST00000197998 747 ntBASIC12.31□□□□□ -0.44
Smco4Q9JIS3 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC12.31□□□□□ -0.44
Smco4Q9JIS3 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC12.31□□□□□ -0.44
Smco4Q9JIS3 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smco4Q9JIS3 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smco4Q9JIS3 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smco4Q9JIS3 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smco4Q9JIS3 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smco4Q9JIS3 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Smco4Q9JIS3 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smco4Q9JIS3 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smco4Q9JIS3 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smco4Q9JIS3 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smco4Q9JIS3 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smco4Q9JIS3 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smco4Q9JIS3 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Smco4Q9JIS3 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smco4Q9JIS3 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smco4Q9JIS3 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smco4Q9JIS3 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smco4Q9JIS3 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smco4Q9JIS3 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Smco4Q9JIS3 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smco4Q9JIS3 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smco4Q9JIS3 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.3□□□□□ -0.44
Smco4Q9JIS3 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smco4Q9JIS3 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smco4Q9JIS3 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smco4Q9JIS3 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smco4Q9JIS3 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Smco4Q9JIS3 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smco4Q9JIS3 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.3□□□□□ -0.44
Smco4Q9JIS3 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Smco4Q9JIS3 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Smco4Q9JIS3 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Smco4Q9JIS3 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC12.3□□□□□ -0.44
Smco4Q9JIS3 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smco4Q9JIS3 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Smco4Q9JIS3 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Smco4Q9JIS3 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC12.3□□□□□ -0.44
Smco4Q9JIS3 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Smco4Q9JIS3 Gm27000-201ENSMUST00000182943 842 ntBASIC12.3□□□□□ -0.44
Smco4Q9JIS3 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC12.3□□□□□ -0.44
Smco4Q9JIS3 Gm44549-201ENSMUST00000208351 577 ntBASIC12.3□□□□□ -0.44
Smco4Q9JIS3 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Smco4Q9JIS3 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smco4Q9JIS3 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smco4Q9JIS3 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smco4Q9JIS3 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Smco4Q9JIS3 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smco4Q9JIS3 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smco4Q9JIS3 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smco4Q9JIS3 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smco4Q9JIS3 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smco4Q9JIS3 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smco4Q9JIS3 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.3□□□□□ -0.44
Smco4Q9JIS3 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smco4Q9JIS3 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Smco4Q9JIS3 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.29□□□□□ -0.44
Smco4Q9JIS3 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.29□□□□□ -0.44
Smco4Q9JIS3 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smco4Q9JIS3 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smco4Q9JIS3 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smco4Q9JIS3 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smco4Q9JIS3 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Smco4Q9JIS3 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Smco4Q9JIS3 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smco4Q9JIS3 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smco4Q9JIS3 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smco4Q9JIS3 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smco4Q9JIS3 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Smco4Q9JIS3 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smco4Q9JIS3 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Smco4Q9JIS3 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smco4Q9JIS3 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Smco4Q9JIS3 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Smco4Q9JIS3 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Smco4Q9JIS3 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smco4Q9JIS3 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smco4Q9JIS3 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smco4Q9JIS3 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smco4Q9JIS3 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Smco4Q9JIS3 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smco4Q9JIS3 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smco4Q9JIS3 Gm10654-201ENSMUST00000098653 1633 ntBASIC12.29□□□□□ -0.44
Smco4Q9JIS3 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smco4Q9JIS3 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smco4Q9JIS3 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smco4Q9JIS3 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smco4Q9JIS3 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smco4Q9JIS3 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smco4Q9JIS3 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smco4Q9JIS3 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smco4Q9JIS3 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms