Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cpsf1Q9EPU4 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Cpsf1Q9EPU4 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cpsf1Q9EPU4 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cpsf1Q9EPU4 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cpsf1Q9EPU4 Gm7336-201ENSMUST00000107041 1232 ntBASIC20.92■□□□□ 0.94
Cpsf1Q9EPU4 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cpsf1Q9EPU4 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC20.92■□□□□ 0.94
Cpsf1Q9EPU4 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cpsf1Q9EPU4 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC20.92■□□□□ 0.94
Cpsf1Q9EPU4 Gm18737-201ENSMUST00000173594 937 ntBASIC20.92■□□□□ 0.94
Cpsf1Q9EPU4 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC20.92■□□□□ 0.94
Cpsf1Q9EPU4 Klk2-ps-201ENSMUST00000205342 571 ntBASIC20.92■□□□□ 0.94
Cpsf1Q9EPU4 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cpsf1Q9EPU4 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cpsf1Q9EPU4 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Cpsf1Q9EPU4 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC20.92■□□□□ 0.94
Cpsf1Q9EPU4 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cpsf1Q9EPU4 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cpsf1Q9EPU4 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cpsf1Q9EPU4 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cpsf1Q9EPU4 Gm42901-201ENSMUST00000197735 3171 ntBASIC20.92■□□□□ 0.94
Cpsf1Q9EPU4 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cpsf1Q9EPU4 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cpsf1Q9EPU4 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cpsf1Q9EPU4 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cpsf1Q9EPU4 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cpsf1Q9EPU4 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
Cpsf1Q9EPU4 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cpsf1Q9EPU4 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC20.91■□□□□ 0.94
Cpsf1Q9EPU4 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cpsf1Q9EPU4 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cpsf1Q9EPU4 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Cpsf1Q9EPU4 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cpsf1Q9EPU4 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cpsf1Q9EPU4 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Cpsf1Q9EPU4 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cpsf1Q9EPU4 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cpsf1Q9EPU4 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cpsf1Q9EPU4 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC20.9■□□□□ 0.94
Cpsf1Q9EPU4 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Cpsf1Q9EPU4 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cpsf1Q9EPU4 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cpsf1Q9EPU4 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC20.9■□□□□ 0.94
Cpsf1Q9EPU4 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cpsf1Q9EPU4 Gm15693-201ENSMUST00000120470 637 ntBASIC20.9■□□□□ 0.94
Cpsf1Q9EPU4 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC20.9■□□□□ 0.94
Cpsf1Q9EPU4 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC20.9■□□□□ 0.94
Cpsf1Q9EPU4 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cpsf1Q9EPU4 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cpsf1Q9EPU4 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cpsf1Q9EPU4 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC20.9■□□□□ 0.94
Cpsf1Q9EPU4 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Cpsf1Q9EPU4 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cpsf1Q9EPU4 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cpsf1Q9EPU4 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Cpsf1Q9EPU4 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cpsf1Q9EPU4 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cpsf1Q9EPU4 Gm42934-201ENSMUST00000196920 1345 ntBASIC20.9■□□□□ 0.94
Cpsf1Q9EPU4 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cpsf1Q9EPU4 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cpsf1Q9EPU4 Gm21009-201ENSMUST00000197169 1669 ntBASIC20.9■□□□□ 0.94
Cpsf1Q9EPU4 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cpsf1Q9EPU4 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cpsf1Q9EPU4 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cpsf1Q9EPU4 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cpsf1Q9EPU4 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC20.89■□□□□ 0.94
Cpsf1Q9EPU4 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Cpsf1Q9EPU4 Gm7063-201ENSMUST00000186840 981 ntBASIC20.89■□□□□ 0.94
Cpsf1Q9EPU4 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC20.89■□□□□ 0.94
Cpsf1Q9EPU4 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cpsf1Q9EPU4 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cpsf1Q9EPU4 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cpsf1Q9EPU4 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cpsf1Q9EPU4 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cpsf1Q9EPU4 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cpsf1Q9EPU4 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cpsf1Q9EPU4 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cpsf1Q9EPU4 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cpsf1Q9EPU4 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cpsf1Q9EPU4 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC20.88■□□□□ 0.93
Cpsf1Q9EPU4 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cpsf1Q9EPU4 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cpsf1Q9EPU4 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cpsf1Q9EPU4 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC20.88■□□□□ 0.93
Cpsf1Q9EPU4 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cpsf1Q9EPU4 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Cpsf1Q9EPU4 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC20.87■□□□□ 0.93
Cpsf1Q9EPU4 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC20.87■□□□□ 0.93
Cpsf1Q9EPU4 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cpsf1Q9EPU4 Gm10253-201ENSMUST00000194270 940 ntBASIC20.87■□□□□ 0.93
Cpsf1Q9EPU4 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cpsf1Q9EPU4 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cpsf1Q9EPU4 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC20.87■□□□□ 0.93
Cpsf1Q9EPU4 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cpsf1Q9EPU4 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cpsf1Q9EPU4 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cpsf1Q9EPU4 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cpsf1Q9EPU4 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cpsf1Q9EPU4 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms