Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Chmp4bQ9D8B3 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp4bQ9D8B3 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp4bQ9D8B3 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp4bQ9D8B3 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp4bQ9D8B3 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Chmp4bQ9D8B3 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp4bQ9D8B3 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Chmp4bQ9D8B3 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp4bQ9D8B3 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC19.22■□□□□ 0.67
Chmp4bQ9D8B3 Gm11185-201ENSMUST00000117732 1007 ntBASIC19.22■□□□□ 0.67
Chmp4bQ9D8B3 Gm11764-201ENSMUST00000120221 623 ntBASIC19.22■□□□□ 0.67
Chmp4bQ9D8B3 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC19.22■□□□□ 0.67
Chmp4bQ9D8B3 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC19.22■□□□□ 0.67
Chmp4bQ9D8B3 Gm17971-201ENSMUST00000190239 806 ntBASIC19.22■□□□□ 0.67
Chmp4bQ9D8B3 Gm37153-201ENSMUST00000193637 231 ntBASIC19.22■□□□□ 0.67
Chmp4bQ9D8B3 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC19.22■□□□□ 0.67
Chmp4bQ9D8B3 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp4bQ9D8B3 AC130671.1-201ENSMUST00000227384 1237 ntBASIC19.22■□□□□ 0.67
Chmp4bQ9D8B3 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp4bQ9D8B3 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp4bQ9D8B3 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp4bQ9D8B3 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp4bQ9D8B3 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Chmp4bQ9D8B3 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp4bQ9D8B3 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp4bQ9D8B3 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp4bQ9D8B3 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC19.22■□□□□ 0.67
Chmp4bQ9D8B3 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp4bQ9D8B3 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp4bQ9D8B3 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp4bQ9D8B3 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp4bQ9D8B3 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp4bQ9D8B3 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp4bQ9D8B3 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Chmp4bQ9D8B3 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Chmp4bQ9D8B3 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp4bQ9D8B3 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp4bQ9D8B3 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp4bQ9D8B3 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp4bQ9D8B3 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp4bQ9D8B3 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp4bQ9D8B3 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
Chmp4bQ9D8B3 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Chmp4bQ9D8B3 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp4bQ9D8B3 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp4bQ9D8B3 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Chmp4bQ9D8B3 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp4bQ9D8B3 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp4bQ9D8B3 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
Chmp4bQ9D8B3 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp4bQ9D8B3 Gm45293-201ENSMUST00000209754 1812 ntBASIC19.21■□□□□ 0.67
Chmp4bQ9D8B3 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp4bQ9D8B3 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC19.2■□□□□ 0.66
Chmp4bQ9D8B3 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC19.2■□□□□ 0.66
Chmp4bQ9D8B3 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp4bQ9D8B3 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Chmp4bQ9D8B3 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp4bQ9D8B3 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp4bQ9D8B3 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp4bQ9D8B3 Gm7230-201ENSMUST00000173026 815 ntBASIC19.2■□□□□ 0.66
Chmp4bQ9D8B3 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp4bQ9D8B3 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp4bQ9D8B3 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp4bQ9D8B3 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp4bQ9D8B3 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp4bQ9D8B3 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
Chmp4bQ9D8B3 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp4bQ9D8B3 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp4bQ9D8B3 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp4bQ9D8B3 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Chmp4bQ9D8B3 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp4bQ9D8B3 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp4bQ9D8B3 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp4bQ9D8B3 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp4bQ9D8B3 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Chmp4bQ9D8B3 AC151836.1-202ENSMUST00000226259 753 ntBASIC19.19■□□□□ 0.66
Chmp4bQ9D8B3 CT009510.1-201ENSMUST00000227972 270 ntBASIC19.19■□□□□ 0.66
Chmp4bQ9D8B3 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp4bQ9D8B3 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp4bQ9D8B3 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp4bQ9D8B3 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC19.19■□□□□ 0.66
Chmp4bQ9D8B3 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp4bQ9D8B3 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp4bQ9D8B3 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp4bQ9D8B3 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp4bQ9D8B3 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp4bQ9D8B3 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp4bQ9D8B3 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp4bQ9D8B3 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp4bQ9D8B3 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp4bQ9D8B3 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Chmp4bQ9D8B3 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp4bQ9D8B3 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp4bQ9D8B3 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC19.18■□□□□ 0.66
Chmp4bQ9D8B3 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp4bQ9D8B3 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp4bQ9D8B3 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp4bQ9D8B3 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC19.18■□□□□ 0.66
Chmp4bQ9D8B3 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms