Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
U2af1Q9D883 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
U2af1Q9D883 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
U2af1Q9D883 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC20.06■□□□□ 0.8
U2af1Q9D883 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
U2af1Q9D883 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
U2af1Q9D883 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
U2af1Q9D883 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
U2af1Q9D883 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC20.06■□□□□ 0.8
U2af1Q9D883 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
U2af1Q9D883 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
U2af1Q9D883 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
U2af1Q9D883 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
U2af1Q9D883 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
U2af1Q9D883 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
U2af1Q9D883 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC20.05■□□□□ 0.8
U2af1Q9D883 Gm43073-201ENSMUST00000198200 1189 ntBASIC20.05■□□□□ 0.8
U2af1Q9D883 Gm45747-201ENSMUST00000212203 999 ntBASIC20.05■□□□□ 0.8
U2af1Q9D883 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
U2af1Q9D883 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
U2af1Q9D883 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
U2af1Q9D883 AC025913.2-201ENSMUST00000220136 1766 ntBASIC20.05■□□□□ 0.8
U2af1Q9D883 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC20.05■□□□□ 0.8
U2af1Q9D883 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
U2af1Q9D883 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
U2af1Q9D883 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
U2af1Q9D883 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
U2af1Q9D883 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
U2af1Q9D883 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
U2af1Q9D883 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
U2af1Q9D883 CT009510.1-201ENSMUST00000227972 270 ntBASIC20.04■□□□□ 0.8
U2af1Q9D883 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC20.04■□□□□ 0.8
U2af1Q9D883 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
U2af1Q9D883 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
U2af1Q9D883 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
U2af1Q9D883 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
U2af1Q9D883 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
U2af1Q9D883 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
U2af1Q9D883 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
U2af1Q9D883 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
U2af1Q9D883 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
U2af1Q9D883 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
U2af1Q9D883 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
U2af1Q9D883 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
U2af1Q9D883 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
U2af1Q9D883 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
U2af1Q9D883 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
U2af1Q9D883 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
U2af1Q9D883 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
U2af1Q9D883 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC20.03■□□□□ 0.8
U2af1Q9D883 Gm12008-201ENSMUST00000117791 755 ntBASIC20.03■□□□□ 0.8
U2af1Q9D883 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
U2af1Q9D883 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC20.03■□□□□ 0.8
U2af1Q9D883 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
U2af1Q9D883 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
U2af1Q9D883 AC225888.1-201ENSMUST00000227184 728 ntBASIC20.03■□□□□ 0.8
U2af1Q9D883 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
U2af1Q9D883 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
U2af1Q9D883 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
U2af1Q9D883 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
U2af1Q9D883 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
U2af1Q9D883 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
U2af1Q9D883 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
U2af1Q9D883 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
U2af1Q9D883 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
U2af1Q9D883 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
U2af1Q9D883 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
U2af1Q9D883 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
U2af1Q9D883 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
U2af1Q9D883 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
U2af1Q9D883 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
U2af1Q9D883 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
U2af1Q9D883 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
U2af1Q9D883 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC20.02■□□□□ 0.8
U2af1Q9D883 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
U2af1Q9D883 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
U2af1Q9D883 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
U2af1Q9D883 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
U2af1Q9D883 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
U2af1Q9D883 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
U2af1Q9D883 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
U2af1Q9D883 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
U2af1Q9D883 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC20.02■□□□□ 0.8
U2af1Q9D883 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
U2af1Q9D883 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
U2af1Q9D883 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
U2af1Q9D883 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
U2af1Q9D883 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC20.02■□□□□ 0.8
U2af1Q9D883 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
U2af1Q9D883 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
U2af1Q9D883 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
U2af1Q9D883 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
U2af1Q9D883 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
U2af1Q9D883 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
U2af1Q9D883 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
U2af1Q9D883 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
U2af1Q9D883 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
U2af1Q9D883 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
U2af1Q9D883 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
U2af1Q9D883 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms