Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc7Q9D541 Gm43195-201ENSMUST00000200614 2332 ntBASIC17.86■□□□□ 0.45
Ccdc7Q9D541 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Ccdc7Q9D541 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc7Q9D541 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Ccdc7Q9D541 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Ccdc7Q9D541 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.86■□□□□ 0.45
Ccdc7Q9D541 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.86■□□□□ 0.45
Ccdc7Q9D541 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.86■□□□□ 0.45
Ccdc7Q9D541 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc7Q9D541 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Ccdc7Q9D541 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC17.86■□□□□ 0.45
Ccdc7Q9D541 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc7Q9D541 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc7Q9D541 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC17.86■□□□□ 0.45
Ccdc7Q9D541 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Ccdc7Q9D541 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.86■□□□□ 0.45
Ccdc7Q9D541 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Ccdc7Q9D541 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc7Q9D541 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc7Q9D541 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc7Q9D541 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Ccdc7Q9D541 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc7Q9D541 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Ccdc7Q9D541 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc7Q9D541 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc7Q9D541 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Ccdc7Q9D541 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc7Q9D541 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc7Q9D541 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc7Q9D541 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Ccdc7Q9D541 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc7Q9D541 Gm4535-201ENSMUST00000182274 558 ntBASIC17.85■□□□□ 0.45
Ccdc7Q9D541 Gm29340-201ENSMUST00000188763 3854 ntBASIC17.85■□□□□ 0.45
Ccdc7Q9D541 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC17.85■□□□□ 0.45
Ccdc7Q9D541 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC17.85■□□□□ 0.45
Ccdc7Q9D541 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc7Q9D541 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc7Q9D541 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc7Q9D541 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc7Q9D541 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc7Q9D541 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc7Q9D541 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc7Q9D541 Gm10355-201ENSMUST00000097146 517 ntBASIC17.85■□□□□ 0.45
Ccdc7Q9D541 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC17.85■□□□□ 0.45
Ccdc7Q9D541 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Ccdc7Q9D541 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Ccdc7Q9D541 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc7Q9D541 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc7Q9D541 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Ccdc7Q9D541 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc7Q9D541 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc7Q9D541 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc7Q9D541 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc7Q9D541 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc7Q9D541 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc7Q9D541 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc7Q9D541 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc7Q9D541 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc7Q9D541 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc7Q9D541 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
Ccdc7Q9D541 Gm44357-201ENSMUST00000195897 142 ntBASIC17.84■□□□□ 0.45
Ccdc7Q9D541 Gm19658-201ENSMUST00000196231 138 ntBASIC17.84■□□□□ 0.45
Ccdc7Q9D541 Gm44367-201ENSMUST00000196836 138 ntBASIC17.84■□□□□ 0.45
Ccdc7Q9D541 Gm44350-201ENSMUST00000197197 138 ntBASIC17.84■□□□□ 0.45
Ccdc7Q9D541 Gm44390-201ENSMUST00000197533 144 ntBASIC17.84■□□□□ 0.45
Ccdc7Q9D541 Gm44313-201ENSMUST00000198018 138 ntBASIC17.84■□□□□ 0.45
Ccdc7Q9D541 Gm44486-201ENSMUST00000198508 138 ntBASIC17.84■□□□□ 0.45
Ccdc7Q9D541 Gm44314-201ENSMUST00000199263 138 ntBASIC17.84■□□□□ 0.45
Ccdc7Q9D541 Gm44394-201ENSMUST00000199558 138 ntBASIC17.84■□□□□ 0.45
Ccdc7Q9D541 Gm44484-201ENSMUST00000199873 138 ntBASIC17.84■□□□□ 0.45
Ccdc7Q9D541 Gm44466-201ENSMUST00000200264 138 ntBASIC17.84■□□□□ 0.45
Ccdc7Q9D541 Gm44359-201ENSMUST00000200671 138 ntBASIC17.84■□□□□ 0.45
Ccdc7Q9D541 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc7Q9D541 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc7Q9D541 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc7Q9D541 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Ccdc7Q9D541 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc7Q9D541 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.84■□□□□ 0.45
Ccdc7Q9D541 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc7Q9D541 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc7Q9D541 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ccdc7Q9D541 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ccdc7Q9D541 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Ccdc7Q9D541 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ccdc7Q9D541 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Ccdc7Q9D541 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ccdc7Q9D541 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc7Q9D541 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc7Q9D541 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc7Q9D541 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc7Q9D541 Gm10499-201ENSMUST00000174094 934 ntBASIC17.83■□□□□ 0.44
Ccdc7Q9D541 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC17.83■□□□□ 0.44
Ccdc7Q9D541 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.83■□□□□ 0.44
Ccdc7Q9D541 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC17.83■□□□□ 0.44
Ccdc7Q9D541 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc7Q9D541 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc7Q9D541 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc7Q9D541 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
Ccdc7Q9D541 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms