Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nip7Q9CXK8 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nip7Q9CXK8 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nip7Q9CXK8 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
Nip7Q9CXK8 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.95■□□□□ 0.62
Nip7Q9CXK8 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nip7Q9CXK8 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nip7Q9CXK8 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nip7Q9CXK8 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nip7Q9CXK8 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Nip7Q9CXK8 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nip7Q9CXK8 Gm27437-201ENSMUST00000183429 107 ntBASIC18.94■□□□□ 0.62
Nip7Q9CXK8 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nip7Q9CXK8 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nip7Q9CXK8 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nip7Q9CXK8 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC18.94■□□□□ 0.62
Nip7Q9CXK8 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC18.94■□□□□ 0.62
Nip7Q9CXK8 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nip7Q9CXK8 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC18.93■□□□□ 0.62
Nip7Q9CXK8 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nip7Q9CXK8 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nip7Q9CXK8 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nip7Q9CXK8 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nip7Q9CXK8 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Nip7Q9CXK8 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nip7Q9CXK8 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC18.93■□□□□ 0.62
Nip7Q9CXK8 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nip7Q9CXK8 Gm27306-201ENSMUST00000183970 107 ntBASIC18.93■□□□□ 0.62
Nip7Q9CXK8 Rbfox2-208ENSMUST00000227930 1218 ntBASIC18.93■□□□□ 0.62
Nip7Q9CXK8 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nip7Q9CXK8 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nip7Q9CXK8 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nip7Q9CXK8 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nip7Q9CXK8 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nip7Q9CXK8 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nip7Q9CXK8 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nip7Q9CXK8 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nip7Q9CXK8 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nip7Q9CXK8 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nip7Q9CXK8 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nip7Q9CXK8 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Nip7Q9CXK8 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Nip7Q9CXK8 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC18.92■□□□□ 0.62
Nip7Q9CXK8 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nip7Q9CXK8 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Nip7Q9CXK8 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nip7Q9CXK8 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nip7Q9CXK8 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Nip7Q9CXK8 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nip7Q9CXK8 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nip7Q9CXK8 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nip7Q9CXK8 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nip7Q9CXK8 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Nip7Q9CXK8 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC18.92■□□□□ 0.62
Nip7Q9CXK8 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Nip7Q9CXK8 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Nip7Q9CXK8 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC18.92■□□□□ 0.62
Nip7Q9CXK8 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC18.92■□□□□ 0.62
Nip7Q9CXK8 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Nip7Q9CXK8 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Nip7Q9CXK8 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Nip7Q9CXK8 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Nip7Q9CXK8 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC18.92■□□□□ 0.62
Nip7Q9CXK8 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Nip7Q9CXK8 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nip7Q9CXK8 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nip7Q9CXK8 Gm42934-201ENSMUST00000196920 1345 ntBASIC18.92■□□□□ 0.62
Nip7Q9CXK8 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nip7Q9CXK8 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nip7Q9CXK8 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC18.92■□□□□ 0.62
Nip7Q9CXK8 Gm13233-201ENSMUST00000118760 1443 ntBASIC18.91■□□□□ 0.62
Nip7Q9CXK8 Gm13244-201ENSMUST00000118855 1446 ntBASIC18.91■□□□□ 0.62
Nip7Q9CXK8 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC18.91■□□□□ 0.62
Nip7Q9CXK8 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Nip7Q9CXK8 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nip7Q9CXK8 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nip7Q9CXK8 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Nip7Q9CXK8 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Nip7Q9CXK8 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nip7Q9CXK8 Gm8410-201ENSMUST00000117225 605 ntBASIC18.91■□□□□ 0.62
Nip7Q9CXK8 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Nip7Q9CXK8 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC18.91■□□□□ 0.62
Nip7Q9CXK8 Gm29541-201ENSMUST00000191351 678 ntBASIC18.91■□□□□ 0.62
Nip7Q9CXK8 Gm8597-201ENSMUST00000191525 1109 ntBASIC18.91■□□□□ 0.62
Nip7Q9CXK8 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Nip7Q9CXK8 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC18.91■□□□□ 0.62
Nip7Q9CXK8 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.91■□□□□ 0.62
Nip7Q9CXK8 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nip7Q9CXK8 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Nip7Q9CXK8 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nip7Q9CXK8 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nip7Q9CXK8 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Nip7Q9CXK8 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nip7Q9CXK8 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nip7Q9CXK8 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nip7Q9CXK8 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC18.9■□□□□ 0.62
Nip7Q9CXK8 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nip7Q9CXK8 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Nip7Q9CXK8 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nip7Q9CXK8 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms