Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx47Q9CWX9 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx47Q9CWX9 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx47Q9CWX9 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Ddx47Q9CWX9 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx47Q9CWX9 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx47Q9CWX9 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx47Q9CWX9 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Ddx47Q9CWX9 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx47Q9CWX9 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx47Q9CWX9 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx47Q9CWX9 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx47Q9CWX9 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx47Q9CWX9 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx47Q9CWX9 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx47Q9CWX9 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx47Q9CWX9 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC15.74■□□□□ 0.11
Ddx47Q9CWX9 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx47Q9CWX9 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC15.74■□□□□ 0.11
Ddx47Q9CWX9 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx47Q9CWX9 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx47Q9CWX9 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx47Q9CWX9 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx47Q9CWX9 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx47Q9CWX9 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx47Q9CWX9 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx47Q9CWX9 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx47Q9CWX9 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC15.73■□□□□ 0.11
Ddx47Q9CWX9 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx47Q9CWX9 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx47Q9CWX9 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Ddx47Q9CWX9 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx47Q9CWX9 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx47Q9CWX9 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx47Q9CWX9 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Ddx47Q9CWX9 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC15.73■□□□□ 0.11
Ddx47Q9CWX9 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC15.73■□□□□ 0.11
Ddx47Q9CWX9 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC15.73■□□□□ 0.11
Ddx47Q9CWX9 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Ddx47Q9CWX9 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.73■□□□□ 0.11
Ddx47Q9CWX9 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx47Q9CWX9 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx47Q9CWX9 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx47Q9CWX9 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC15.73■□□□□ 0.11
Ddx47Q9CWX9 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx47Q9CWX9 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx47Q9CWX9 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx47Q9CWX9 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx47Q9CWX9 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx47Q9CWX9 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx47Q9CWX9 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx47Q9CWX9 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.72■□□□□ 0.11
Ddx47Q9CWX9 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx47Q9CWX9 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx47Q9CWX9 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
Ddx47Q9CWX9 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx47Q9CWX9 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx47Q9CWX9 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx47Q9CWX9 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx47Q9CWX9 Carlr-201ENSMUST00000181515 2574 ntBASIC15.72■□□□□ 0.11
Ddx47Q9CWX9 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.72■□□□□ 0.11
Ddx47Q9CWX9 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx47Q9CWX9 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx47Q9CWX9 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx47Q9CWX9 Gm37722-201ENSMUST00000193757 208 ntBASIC15.72■□□□□ 0.11
Ddx47Q9CWX9 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.72■□□□□ 0.11
Ddx47Q9CWX9 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx47Q9CWX9 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Ddx47Q9CWX9 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx47Q9CWX9 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.72■□□□□ 0.11
Ddx47Q9CWX9 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx47Q9CWX9 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.72■□□□□ 0.11
Ddx47Q9CWX9 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx47Q9CWX9 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx47Q9CWX9 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.72■□□□□ 0.11
Ddx47Q9CWX9 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Ddx47Q9CWX9 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC15.72■□□□□ 0.11
Ddx47Q9CWX9 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx47Q9CWX9 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx47Q9CWX9 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.72■□□□□ 0.11
Ddx47Q9CWX9 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.71■□□□□ 0.11
Ddx47Q9CWX9 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx47Q9CWX9 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx47Q9CWX9 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx47Q9CWX9 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
Ddx47Q9CWX9 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx47Q9CWX9 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx47Q9CWX9 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
Ddx47Q9CWX9 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx47Q9CWX9 Gm23547-201ENSMUST00000158210 271 ntBASIC15.71■□□□□ 0.11
Ddx47Q9CWX9 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx47Q9CWX9 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Ddx47Q9CWX9 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC15.71■□□□□ 0.11
Ddx47Q9CWX9 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx47Q9CWX9 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx47Q9CWX9 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx47Q9CWX9 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Ddx47Q9CWX9 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx47Q9CWX9 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx47Q9CWX9 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms