Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx28Q9CWT6 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx28Q9CWT6 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx28Q9CWT6 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx28Q9CWT6 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx28Q9CWT6 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx28Q9CWT6 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ddx28Q9CWT6 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx28Q9CWT6 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ddx28Q9CWT6 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx28Q9CWT6 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx28Q9CWT6 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.35□□□□□ -0.11
Ddx28Q9CWT6 Gm7284-201ENSMUST00000131667 944 ntBASIC14.35□□□□□ -0.11
Ddx28Q9CWT6 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx28Q9CWT6 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx28Q9CWT6 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Ddx28Q9CWT6 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx28Q9CWT6 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx28Q9CWT6 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ddx28Q9CWT6 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx28Q9CWT6 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx28Q9CWT6 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.35□□□□□ -0.11
Ddx28Q9CWT6 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ddx28Q9CWT6 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx28Q9CWT6 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx28Q9CWT6 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ddx28Q9CWT6 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ddx28Q9CWT6 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx28Q9CWT6 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ddx28Q9CWT6 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx28Q9CWT6 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Ddx28Q9CWT6 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx28Q9CWT6 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx28Q9CWT6 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx28Q9CWT6 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx28Q9CWT6 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx28Q9CWT6 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx28Q9CWT6 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ddx28Q9CWT6 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx28Q9CWT6 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.34□□□□□ -0.11
Ddx28Q9CWT6 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx28Q9CWT6 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx28Q9CWT6 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.34□□□□□ -0.11
Ddx28Q9CWT6 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx28Q9CWT6 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.34□□□□□ -0.11
Ddx28Q9CWT6 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx28Q9CWT6 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx28Q9CWT6 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx28Q9CWT6 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Ddx28Q9CWT6 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
Ddx28Q9CWT6 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.34□□□□□ -0.11
Ddx28Q9CWT6 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx28Q9CWT6 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx28Q9CWT6 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ddx28Q9CWT6 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ddx28Q9CWT6 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ddx28Q9CWT6 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ddx28Q9CWT6 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx28Q9CWT6 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ddx28Q9CWT6 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx28Q9CWT6 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx28Q9CWT6 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.33□□□□□ -0.12
Ddx28Q9CWT6 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.33□□□□□ -0.12
Ddx28Q9CWT6 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.33□□□□□ -0.12
Ddx28Q9CWT6 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.33□□□□□ -0.12
Ddx28Q9CWT6 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.33□□□□□ -0.12
Ddx28Q9CWT6 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx28Q9CWT6 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.33□□□□□ -0.12
Ddx28Q9CWT6 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx28Q9CWT6 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx28Q9CWT6 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx28Q9CWT6 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx28Q9CWT6 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx28Q9CWT6 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx28Q9CWT6 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx28Q9CWT6 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx28Q9CWT6 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx28Q9CWT6 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx28Q9CWT6 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx28Q9CWT6 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ddx28Q9CWT6 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx28Q9CWT6 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.33□□□□□ -0.12
Ddx28Q9CWT6 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx28Q9CWT6 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx28Q9CWT6 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx28Q9CWT6 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.32□□□□□ -0.12
Ddx28Q9CWT6 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx28Q9CWT6 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx28Q9CWT6 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx28Q9CWT6 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx28Q9CWT6 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ddx28Q9CWT6 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx28Q9CWT6 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx28Q9CWT6 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ddx28Q9CWT6 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ddx28Q9CWT6 Gm13312-201ENSMUST00000119631 718 ntBASIC14.32□□□□□ -0.12
Ddx28Q9CWT6 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx28Q9CWT6 Gm27704-201ENSMUST00000185094 107 ntBASIC14.32□□□□□ -0.12
Ddx28Q9CWT6 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Ddx28Q9CWT6 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms