Protein–RNA interactions for Protein: Q9CR40

Klhl28, Kelch-like protein 28, mousemouse

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Klhl28Q9CR40 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Klhl28Q9CR40 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Klhl28Q9CR40 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.88□□□□□ -0.03
Klhl28Q9CR40 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Klhl28Q9CR40 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Klhl28Q9CR40 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Klhl28Q9CR40 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Klhl28Q9CR40 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Klhl28Q9CR40 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
Klhl28Q9CR40 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Klhl28Q9CR40 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Klhl28Q9CR40 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.87□□□□□ -0.03
Klhl28Q9CR40 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Klhl28Q9CR40 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Klhl28Q9CR40 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Klhl28Q9CR40 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Klhl28Q9CR40 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Klhl28Q9CR40 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.87□□□□□ -0.03
Klhl28Q9CR40 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.87□□□□□ -0.03
Klhl28Q9CR40 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Klhl28Q9CR40 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.87□□□□□ -0.03
Klhl28Q9CR40 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.87□□□□□ -0.03
Klhl28Q9CR40 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Klhl28Q9CR40 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.87□□□□□ -0.03
Klhl28Q9CR40 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Klhl28Q9CR40 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Klhl28Q9CR40 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Klhl28Q9CR40 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Klhl28Q9CR40 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Klhl28Q9CR40 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Klhl28Q9CR40 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Klhl28Q9CR40 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
Klhl28Q9CR40 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Klhl28Q9CR40 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
Klhl28Q9CR40 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Klhl28Q9CR40 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Klhl28Q9CR40 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Klhl28Q9CR40 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Klhl28Q9CR40 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Klhl28Q9CR40 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.86□□□□□ -0.03
Klhl28Q9CR40 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Klhl28Q9CR40 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Klhl28Q9CR40 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.86□□□□□ -0.03
Klhl28Q9CR40 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Klhl28Q9CR40 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.86□□□□□ -0.03
Klhl28Q9CR40 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Klhl28Q9CR40 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Klhl28Q9CR40 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Klhl28Q9CR40 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Klhl28Q9CR40 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Klhl28Q9CR40 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Klhl28Q9CR40 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Klhl28Q9CR40 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.86□□□□□ -0.03
Klhl28Q9CR40 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Klhl28Q9CR40 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Klhl28Q9CR40 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Klhl28Q9CR40 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Klhl28Q9CR40 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Klhl28Q9CR40 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Klhl28Q9CR40 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Klhl28Q9CR40 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Klhl28Q9CR40 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Klhl28Q9CR40 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Klhl28Q9CR40 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Klhl28Q9CR40 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Klhl28Q9CR40 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
Klhl28Q9CR40 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.85□□□□□ -0.03
Klhl28Q9CR40 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.85□□□□□ -0.03
Klhl28Q9CR40 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.85□□□□□ -0.03
Klhl28Q9CR40 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.85□□□□□ -0.03
Klhl28Q9CR40 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.85□□□□□ -0.03
Klhl28Q9CR40 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Klhl28Q9CR40 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Klhl28Q9CR40 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Klhl28Q9CR40 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Klhl28Q9CR40 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Klhl28Q9CR40 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Klhl28Q9CR40 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Klhl28Q9CR40 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Klhl28Q9CR40 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Klhl28Q9CR40 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Klhl28Q9CR40 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Klhl28Q9CR40 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Klhl28Q9CR40 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Klhl28Q9CR40 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Klhl28Q9CR40 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.84□□□□□ -0.03
Klhl28Q9CR40 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Klhl28Q9CR40 Gm8097-201ENSMUST00000117903 829 ntBASIC14.84□□□□□ -0.03
Klhl28Q9CR40 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.84□□□□□ -0.03
Klhl28Q9CR40 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.84□□□□□ -0.03
Klhl28Q9CR40 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Klhl28Q9CR40 Gm18669-201ENSMUST00000216049 778 ntBASIC14.84□□□□□ -0.03
Klhl28Q9CR40 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Klhl28Q9CR40 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Klhl28Q9CR40 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Klhl28Q9CR40 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Klhl28Q9CR40 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Klhl28Q9CR40 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Klhl28Q9CR40 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Klhl28Q9CR40 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms