Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Retreg3Q9CQV4 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retreg3Q9CQV4 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retreg3Q9CQV4 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Retreg3Q9CQV4 Gm15467-201ENSMUST00000120582 445 ntBASIC15.4■□□□□ 0.06
Retreg3Q9CQV4 Gm11594-201ENSMUST00000122313 162 ntBASIC15.4■□□□□ 0.06
Retreg3Q9CQV4 AV099323-201ENSMUST00000124336 921 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Retreg3Q9CQV4 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
Retreg3Q9CQV4 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retreg3Q9CQV4 Gm37153-201ENSMUST00000193637 231 ntBASIC15.4■□□□□ 0.06
Retreg3Q9CQV4 Gm44953-201ENSMUST00000208745 1286 ntBASIC15.4■□□□□ 0.06
Retreg3Q9CQV4 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retreg3Q9CQV4 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Retreg3Q9CQV4 AV026068-213ENSMUST00000223675 1171 ntBASIC15.4■□□□□ 0.06
Retreg3Q9CQV4 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retreg3Q9CQV4 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retreg3Q9CQV4 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retreg3Q9CQV4 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.4■□□□□ 0.06
Retreg3Q9CQV4 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Retreg3Q9CQV4 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retreg3Q9CQV4 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Retreg3Q9CQV4 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retreg3Q9CQV4 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
Retreg3Q9CQV4 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retreg3Q9CQV4 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.4■□□□□ 0.06
Retreg3Q9CQV4 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Retreg3Q9CQV4 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Retreg3Q9CQV4 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retreg3Q9CQV4 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retreg3Q9CQV4 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retreg3Q9CQV4 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Retreg3Q9CQV4 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retreg3Q9CQV4 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
Retreg3Q9CQV4 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retreg3Q9CQV4 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Retreg3Q9CQV4 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retreg3Q9CQV4 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Retreg3Q9CQV4 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retreg3Q9CQV4 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Retreg3Q9CQV4 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retreg3Q9CQV4 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retreg3Q9CQV4 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
Retreg3Q9CQV4 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.39■□□□□ 0.05
Retreg3Q9CQV4 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Retreg3Q9CQV4 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Retreg3Q9CQV4 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.39■□□□□ 0.05
Retreg3Q9CQV4 Gm9682-201ENSMUST00000197505 556 ntBASIC15.39■□□□□ 0.05
Retreg3Q9CQV4 Gm45167-201ENSMUST00000208007 322 ntBASIC15.39■□□□□ 0.05
Retreg3Q9CQV4 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
Retreg3Q9CQV4 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.39■□□□□ 0.05
Retreg3Q9CQV4 Psmb5-202ENSMUST00000227257 622 ntBASIC15.39■□□□□ 0.05
Retreg3Q9CQV4 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retreg3Q9CQV4 Gm15590-201ENSMUST00000078419 552 ntBASIC15.39■□□□□ 0.05
Retreg3Q9CQV4 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retreg3Q9CQV4 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Retreg3Q9CQV4 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retreg3Q9CQV4 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Retreg3Q9CQV4 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Retreg3Q9CQV4 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retreg3Q9CQV4 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retreg3Q9CQV4 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retreg3Q9CQV4 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.38■□□□□ 0.05
Retreg3Q9CQV4 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retreg3Q9CQV4 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retreg3Q9CQV4 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Retreg3Q9CQV4 Gm13036-201ENSMUST00000117799 748 ntBASIC15.38■□□□□ 0.05
Retreg3Q9CQV4 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Retreg3Q9CQV4 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.38■□□□□ 0.05
Retreg3Q9CQV4 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Retreg3Q9CQV4 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retreg3Q9CQV4 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Retreg3Q9CQV4 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Retreg3Q9CQV4 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retreg3Q9CQV4 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Retreg3Q9CQV4 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retreg3Q9CQV4 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retreg3Q9CQV4 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retreg3Q9CQV4 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Retreg3Q9CQV4 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
Retreg3Q9CQV4 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.38■□□□□ 0.05
Retreg3Q9CQV4 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retreg3Q9CQV4 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retreg3Q9CQV4 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retreg3Q9CQV4 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.38■□□□□ 0.05
Retreg3Q9CQV4 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retreg3Q9CQV4 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.38■□□□□ 0.05
Retreg3Q9CQV4 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retreg3Q9CQV4 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.37■□□□□ 0.05
Retreg3Q9CQV4 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Retreg3Q9CQV4 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retreg3Q9CQV4 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retreg3Q9CQV4 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retreg3Q9CQV4 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retreg3Q9CQV4 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Retreg3Q9CQV4 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.37■□□□□ 0.05
Retreg3Q9CQV4 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.37■□□□□ 0.05
Retreg3Q9CQV4 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.37■□□□□ 0.05
Retreg3Q9CQV4 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retreg3Q9CQV4 Gm18489-201ENSMUST00000172565 551 ntBASIC15.37■□□□□ 0.05
Retreg3Q9CQV4 Gm4899-201ENSMUST00000178708 719 ntBASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms