Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
RTRAFQ9CQE8 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
RTRAFQ9CQE8 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RTRAFQ9CQE8 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
RTRAFQ9CQE8 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RTRAFQ9CQE8 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
RTRAFQ9CQE8 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
RTRAFQ9CQE8 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
RTRAFQ9CQE8 Gm20049-201ENSMUST00000219950 730 ntBASIC12.46□□□□□ -0.41
RTRAFQ9CQE8 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RTRAFQ9CQE8 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
RTRAFQ9CQE8 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.46□□□□□ -0.41
RTRAFQ9CQE8 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
RTRAFQ9CQE8 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
RTRAFQ9CQE8 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
RTRAFQ9CQE8 Efs-202ENSMUST00000227037 2540 ntBASIC12.46□□□□□ -0.42
RTRAFQ9CQE8 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
RTRAFQ9CQE8 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
RTRAFQ9CQE8 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.46□□□□□ -0.42
RTRAFQ9CQE8 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
RTRAFQ9CQE8 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
RTRAFQ9CQE8 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
RTRAFQ9CQE8 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.45□□□□□ -0.42
RTRAFQ9CQE8 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
RTRAFQ9CQE8 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RTRAFQ9CQE8 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RTRAFQ9CQE8 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RTRAFQ9CQE8 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
RTRAFQ9CQE8 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RTRAFQ9CQE8 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC12.45□□□□□ -0.42
RTRAFQ9CQE8 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RTRAFQ9CQE8 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
RTRAFQ9CQE8 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RTRAFQ9CQE8 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
RTRAFQ9CQE8 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RTRAFQ9CQE8 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
RTRAFQ9CQE8 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RTRAFQ9CQE8 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.45□□□□□ -0.42
RTRAFQ9CQE8 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RTRAFQ9CQE8 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RTRAFQ9CQE8 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
RTRAFQ9CQE8 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
RTRAFQ9CQE8 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
RTRAFQ9CQE8 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RTRAFQ9CQE8 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
RTRAFQ9CQE8 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.45□□□□□ -0.42
RTRAFQ9CQE8 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RTRAFQ9CQE8 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RTRAFQ9CQE8 Gm44450-201ENSMUST00000199528 114 ntBASIC12.45□□□□□ -0.42
RTRAFQ9CQE8 Gm18421-201ENSMUST00000204122 625 ntBASIC12.45□□□□□ -0.42
RTRAFQ9CQE8 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC12.45□□□□□ -0.42
RTRAFQ9CQE8 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RTRAFQ9CQE8 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RTRAFQ9CQE8 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
RTRAFQ9CQE8 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RTRAFQ9CQE8 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RTRAFQ9CQE8 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
RTRAFQ9CQE8 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RTRAFQ9CQE8 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
RTRAFQ9CQE8 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RTRAFQ9CQE8 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
RTRAFQ9CQE8 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
RTRAFQ9CQE8 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.45□□□□□ -0.42
RTRAFQ9CQE8 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RTRAFQ9CQE8 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.45□□□□□ -0.42
RTRAFQ9CQE8 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.44□□□□□ -0.42
RTRAFQ9CQE8 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
RTRAFQ9CQE8 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RTRAFQ9CQE8 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RTRAFQ9CQE8 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RTRAFQ9CQE8 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.44□□□□□ -0.42
RTRAFQ9CQE8 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.44□□□□□ -0.42
RTRAFQ9CQE8 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
RTRAFQ9CQE8 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RTRAFQ9CQE8 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RTRAFQ9CQE8 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.44□□□□□ -0.42
RTRAFQ9CQE8 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RTRAFQ9CQE8 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RTRAFQ9CQE8 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
RTRAFQ9CQE8 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RTRAFQ9CQE8 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RTRAFQ9CQE8 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RTRAFQ9CQE8 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RTRAFQ9CQE8 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RTRAFQ9CQE8 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
RTRAFQ9CQE8 Trmt13-210ENSMUST00000198454 880 ntBASIC12.44□□□□□ -0.42
RTRAFQ9CQE8 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RTRAFQ9CQE8 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RTRAFQ9CQE8 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RTRAFQ9CQE8 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
RTRAFQ9CQE8 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
RTRAFQ9CQE8 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RTRAFQ9CQE8 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
RTRAFQ9CQE8 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RTRAFQ9CQE8 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
RTRAFQ9CQE8 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
RTRAFQ9CQE8 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RTRAFQ9CQE8 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RTRAFQ9CQE8 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
RTRAFQ9CQE8 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms