Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim16Q99PP9 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim16Q99PP9 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim16Q99PP9 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim16Q99PP9 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim16Q99PP9 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim16Q99PP9 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim16Q99PP9 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim16Q99PP9 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim16Q99PP9 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim16Q99PP9 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim16Q99PP9 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.96□□□□□ -0.02
Trim16Q99PP9 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Trim16Q99PP9 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim16Q99PP9 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim16Q99PP9 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim16Q99PP9 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Trim16Q99PP9 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim16Q99PP9 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim16Q99PP9 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim16Q99PP9 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim16Q99PP9 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.95□□□□□ -0.02
Trim16Q99PP9 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trim16Q99PP9 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim16Q99PP9 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Trim16Q99PP9 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trim16Q99PP9 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Trim16Q99PP9 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim16Q99PP9 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
Trim16Q99PP9 Gm27459-201ENSMUST00000184860 107 ntBASIC14.95□□□□□ -0.02
Trim16Q99PP9 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.95□□□□□ -0.02
Trim16Q99PP9 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.95□□□□□ -0.02
Trim16Q99PP9 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim16Q99PP9 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim16Q99PP9 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim16Q99PP9 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim16Q99PP9 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Trim16Q99PP9 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim16Q99PP9 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.95□□□□□ -0.02
Trim16Q99PP9 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trim16Q99PP9 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.95□□□□□ -0.02
Trim16Q99PP9 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim16Q99PP9 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim16Q99PP9 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim16Q99PP9 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim16Q99PP9 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim16Q99PP9 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.94□□□□□ -0.02
Trim16Q99PP9 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim16Q99PP9 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim16Q99PP9 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim16Q99PP9 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim16Q99PP9 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim16Q99PP9 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim16Q99PP9 Gm7153-201ENSMUST00000117092 455 ntBASIC14.94□□□□□ -0.02
Trim16Q99PP9 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim16Q99PP9 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.94□□□□□ -0.02
Trim16Q99PP9 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim16Q99PP9 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim16Q99PP9 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim16Q99PP9 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim16Q99PP9 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim16Q99PP9 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim16Q99PP9 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim16Q99PP9 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trim16Q99PP9 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim16Q99PP9 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim16Q99PP9 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim16Q99PP9 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim16Q99PP9 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.93□□□□□ -0.02
Trim16Q99PP9 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trim16Q99PP9 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trim16Q99PP9 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim16Q99PP9 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim16Q99PP9 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim16Q99PP9 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim16Q99PP9 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim16Q99PP9 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim16Q99PP9 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim16Q99PP9 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim16Q99PP9 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
Trim16Q99PP9 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim16Q99PP9 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.93□□□□□ -0.02
Trim16Q99PP9 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim16Q99PP9 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim16Q99PP9 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim16Q99PP9 Gm43347-201ENSMUST00000200226 580 ntBASIC14.93□□□□□ -0.02
Trim16Q99PP9 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.93□□□□□ -0.02
Trim16Q99PP9 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim16Q99PP9 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Trim16Q99PP9 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.93□□□□□ -0.02
Trim16Q99PP9 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
Trim16Q99PP9 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.93□□□□□ -0.02
Trim16Q99PP9 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim16Q99PP9 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim16Q99PP9 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim16Q99PP9 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim16Q99PP9 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
Trim16Q99PP9 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trim16Q99PP9 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim16Q99PP9 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms