Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim33Q99PP7 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim33Q99PP7 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim33Q99PP7 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim33Q99PP7 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trim33Q99PP7 Gm7862-201ENSMUST00000121461 292 ntBASIC15.17■□□□□ 0.02
Trim33Q99PP7 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim33Q99PP7 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.17■□□□□ 0.02
Trim33Q99PP7 Gm27646-201ENSMUST00000183989 110 ntBASIC15.17■□□□□ 0.02
Trim33Q99PP7 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.17■□□□□ 0.02
Trim33Q99PP7 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.17■□□□□ 0.02
Trim33Q99PP7 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim33Q99PP7 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim33Q99PP7 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim33Q99PP7 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim33Q99PP7 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim33Q99PP7 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim33Q99PP7 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim33Q99PP7 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.17■□□□□ 0.02
Trim33Q99PP7 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim33Q99PP7 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim33Q99PP7 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.16■□□□□ 0.02
Trim33Q99PP7 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim33Q99PP7 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Trim33Q99PP7 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim33Q99PP7 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trim33Q99PP7 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.16■□□□□ 0.02
Trim33Q99PP7 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trim33Q99PP7 Sybu-209ENSMUST00000228639 4113 ntBASIC15.16■□□□□ 0.02
Trim33Q99PP7 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.16■□□□□ 0.02
Trim33Q99PP7 Gm6089-201ENSMUST00000197666 938 ntBASIC15.16■□□□□ 0.02
Trim33Q99PP7 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.16■□□□□ 0.02
Trim33Q99PP7 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.16■□□□□ 0.02
Trim33Q99PP7 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.16■□□□□ 0.02
Trim33Q99PP7 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.16■□□□□ 0.02
Trim33Q99PP7 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim33Q99PP7 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim33Q99PP7 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim33Q99PP7 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim33Q99PP7 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim33Q99PP7 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trim33Q99PP7 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim33Q99PP7 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim33Q99PP7 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim33Q99PP7 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim33Q99PP7 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim33Q99PP7 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.16■□□□□ 0.02
Trim33Q99PP7 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim33Q99PP7 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim33Q99PP7 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim33Q99PP7 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim33Q99PP7 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim33Q99PP7 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15.15■□□□□ 0.02
Trim33Q99PP7 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Trim33Q99PP7 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.15■□□□□ 0.02
Trim33Q99PP7 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim33Q99PP7 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.15■□□□□ 0.02
Trim33Q99PP7 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim33Q99PP7 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim33Q99PP7 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.15■□□□□ 0.02
Trim33Q99PP7 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim33Q99PP7 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim33Q99PP7 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim33Q99PP7 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim33Q99PP7 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
Trim33Q99PP7 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim33Q99PP7 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim33Q99PP7 Gm7461-201ENSMUST00000058918 827 ntBASIC15.15■□□□□ 0.02
Trim33Q99PP7 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.15■□□□□ 0.02
Trim33Q99PP7 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim33Q99PP7 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trim33Q99PP7 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim33Q99PP7 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim33Q99PP7 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim33Q99PP7 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim33Q99PP7 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.15■□□□□ 0.02
Trim33Q99PP7 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim33Q99PP7 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim33Q99PP7 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim33Q99PP7 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim33Q99PP7 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim33Q99PP7 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim33Q99PP7 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.14■□□□□ 0.01
Trim33Q99PP7 Gm15358-201ENSMUST00000119249 520 ntBASIC15.14■□□□□ 0.01
Trim33Q99PP7 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Trim33Q99PP7 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim33Q99PP7 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.14■□□□□ 0.01
Trim33Q99PP7 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim33Q99PP7 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim33Q99PP7 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim33Q99PP7 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim33Q99PP7 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Trim33Q99PP7 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim33Q99PP7 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.14■□□□□ 0.01
Trim33Q99PP7 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.14■□□□□ 0.01
Trim33Q99PP7 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim33Q99PP7 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim33Q99PP7 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim33Q99PP7 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trim33Q99PP7 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms