Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
Msh4Q99MT2 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Msh4Q99MT2 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Msh4Q99MT2 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Msh4Q99MT2 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Msh4Q99MT2 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Msh4Q99MT2 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Msh4Q99MT2 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Msh4Q99MT2 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Msh4Q99MT2 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Msh4Q99MT2 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Msh4Q99MT2 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Msh4Q99MT2 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Msh4Q99MT2 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Msh4Q99MT2 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Msh4Q99MT2 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Msh4Q99MT2 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Msh4Q99MT2 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Msh4Q99MT2 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Msh4Q99MT2 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
Msh4Q99MT2 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Msh4Q99MT2 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Msh4Q99MT2 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Msh4Q99MT2 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Msh4Q99MT2 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Msh4Q99MT2 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Msh4Q99MT2 Gm11780-201ENSMUST00000136880 516 ntBASIC14.9□□□□□ -0.02
Msh4Q99MT2 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
Msh4Q99MT2 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Msh4Q99MT2 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Msh4Q99MT2 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Msh4Q99MT2 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Msh4Q99MT2 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Msh4Q99MT2 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Msh4Q99MT2 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
Msh4Q99MT2 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Msh4Q99MT2 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Msh4Q99MT2 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Msh4Q99MT2 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Msh4Q99MT2 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Msh4Q99MT2 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Msh4Q99MT2 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Msh4Q99MT2 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Msh4Q99MT2 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Msh4Q99MT2 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Msh4Q99MT2 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Msh4Q99MT2 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Msh4Q99MT2 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Msh4Q99MT2 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Msh4Q99MT2 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Msh4Q99MT2 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Msh4Q99MT2 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Msh4Q99MT2 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Msh4Q99MT2 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Msh4Q99MT2 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Msh4Q99MT2 Mir5131-201ENSMUST00000175426 93 ntBASIC14.89□□□□□ -0.03
Msh4Q99MT2 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.89□□□□□ -0.03
Msh4Q99MT2 Gm2651-201ENSMUST00000203560 838 ntBASIC14.89□□□□□ -0.03
Msh4Q99MT2 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Msh4Q99MT2 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.89□□□□□ -0.03
Msh4Q99MT2 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.89□□□□□ -0.03
Msh4Q99MT2 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.89□□□□□ -0.03
Msh4Q99MT2 Gm18622-201ENSMUST00000219361 595 ntBASIC14.89□□□□□ -0.03
Msh4Q99MT2 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Msh4Q99MT2 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Msh4Q99MT2 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.89□□□□□ -0.03
Msh4Q99MT2 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Msh4Q99MT2 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.89□□□□□ -0.03
Msh4Q99MT2 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Msh4Q99MT2 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Msh4Q99MT2 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Msh4Q99MT2 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Msh4Q99MT2 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Msh4Q99MT2 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Msh4Q99MT2 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.89□□□□□ -0.03
Msh4Q99MT2 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Msh4Q99MT2 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Msh4Q99MT2 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Msh4Q99MT2 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Msh4Q99MT2 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
Msh4Q99MT2 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.88□□□□□ -0.03
Msh4Q99MT2 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Msh4Q99MT2 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Msh4Q99MT2 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Msh4Q99MT2 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Msh4Q99MT2 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.88□□□□□ -0.03
Msh4Q99MT2 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.88□□□□□ -0.03
Msh4Q99MT2 Gm7230-201ENSMUST00000173026 815 ntBASIC14.88□□□□□ -0.03
Msh4Q99MT2 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.88□□□□□ -0.03
Msh4Q99MT2 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.88□□□□□ -0.03
Msh4Q99MT2 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Msh4Q99MT2 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.88□□□□□ -0.03
Msh4Q99MT2 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.88□□□□□ -0.03
Msh4Q99MT2 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.88□□□□□ -0.03
Msh4Q99MT2 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Msh4Q99MT2 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Msh4Q99MT2 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Msh4Q99MT2 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Msh4Q99MT2 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Msh4Q99MT2 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms