Protein–RNA interactions for Protein: Q99MS8

Tpgs1, Tubulin polyglutamylase complex subunit 1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpgs1Q99MS8 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Tpgs1Q99MS8 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tpgs1Q99MS8 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Tpgs1Q99MS8 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tpgs1Q99MS8 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.88■□□□□ 0.13
Tpgs1Q99MS8 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Tpgs1Q99MS8 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tpgs1Q99MS8 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tpgs1Q99MS8 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tpgs1Q99MS8 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tpgs1Q99MS8 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Tpgs1Q99MS8 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.88■□□□□ 0.13
Tpgs1Q99MS8 Gm27525-201ENSMUST00000184465 107 ntBASIC15.88■□□□□ 0.13
Tpgs1Q99MS8 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Tpgs1Q99MS8 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.88■□□□□ 0.13
Tpgs1Q99MS8 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Tpgs1Q99MS8 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tpgs1Q99MS8 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Tpgs1Q99MS8 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tpgs1Q99MS8 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.88■□□□□ 0.13
Tpgs1Q99MS8 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Tpgs1Q99MS8 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tpgs1Q99MS8 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Tpgs1Q99MS8 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Tpgs1Q99MS8 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tpgs1Q99MS8 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.88■□□□□ 0.13
Tpgs1Q99MS8 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tpgs1Q99MS8 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tpgs1Q99MS8 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tpgs1Q99MS8 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Tpgs1Q99MS8 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Tpgs1Q99MS8 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tpgs1Q99MS8 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Tpgs1Q99MS8 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Tpgs1Q99MS8 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tpgs1Q99MS8 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.87■□□□□ 0.13
Tpgs1Q99MS8 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tpgs1Q99MS8 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.87■□□□□ 0.13
Tpgs1Q99MS8 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tpgs1Q99MS8 Gm11779-201ENSMUST00000118541 368 ntBASIC15.87■□□□□ 0.13
Tpgs1Q99MS8 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Tpgs1Q99MS8 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.87■□□□□ 0.13
Tpgs1Q99MS8 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.87■□□□□ 0.13
Tpgs1Q99MS8 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tpgs1Q99MS8 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tpgs1Q99MS8 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.87■□□□□ 0.13
Tpgs1Q99MS8 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tpgs1Q99MS8 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tpgs1Q99MS8 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.87■□□□□ 0.13
Tpgs1Q99MS8 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tpgs1Q99MS8 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tpgs1Q99MS8 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Tpgs1Q99MS8 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.87■□□□□ 0.13
Tpgs1Q99MS8 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Tpgs1Q99MS8 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.86■□□□□ 0.13
Tpgs1Q99MS8 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tpgs1Q99MS8 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tpgs1Q99MS8 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tpgs1Q99MS8 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Tpgs1Q99MS8 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tpgs1Q99MS8 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
Tpgs1Q99MS8 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tpgs1Q99MS8 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tpgs1Q99MS8 Gm15467-201ENSMUST00000120582 445 ntBASIC15.86■□□□□ 0.13
Tpgs1Q99MS8 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Tpgs1Q99MS8 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Tpgs1Q99MS8 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.86■□□□□ 0.13
Tpgs1Q99MS8 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC15.86■□□□□ 0.13
Tpgs1Q99MS8 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.86■□□□□ 0.13
Tpgs1Q99MS8 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.86■□□□□ 0.13
Tpgs1Q99MS8 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.86■□□□□ 0.13
Tpgs1Q99MS8 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tpgs1Q99MS8 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Tpgs1Q99MS8 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tpgs1Q99MS8 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tpgs1Q99MS8 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
Tpgs1Q99MS8 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Tpgs1Q99MS8 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tpgs1Q99MS8 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tpgs1Q99MS8 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.85■□□□□ 0.13
Tpgs1Q99MS8 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tpgs1Q99MS8 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tpgs1Q99MS8 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tpgs1Q99MS8 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.85■□□□□ 0.13
Tpgs1Q99MS8 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tpgs1Q99MS8 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tpgs1Q99MS8 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.85■□□□□ 0.13
Tpgs1Q99MS8 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC15.85■□□□□ 0.13
Tpgs1Q99MS8 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tpgs1Q99MS8 Gm5177-201ENSMUST00000183092 997 ntBASIC15.85■□□□□ 0.13
Tpgs1Q99MS8 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.85■□□□□ 0.13
Tpgs1Q99MS8 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.85■□□□□ 0.13
Tpgs1Q99MS8 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.85■□□□□ 0.13
Tpgs1Q99MS8 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tpgs1Q99MS8 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.85■□□□□ 0.13
Tpgs1Q99MS8 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tpgs1Q99MS8 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tpgs1Q99MS8 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.85■□□□□ 0.13
Tpgs1Q99MS8 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tpgs1Q99MS8 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms