Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkd1Q99MH6 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Nkd1Q99MH6 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkd1Q99MH6 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Nkd1Q99MH6 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.44□□□□□ -0.1
Nkd1Q99MH6 Gm6659-201ENSMUST00000174752 547 ntBASIC14.44□□□□□ -0.1
Nkd1Q99MH6 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.44□□□□□ -0.1
Nkd1Q99MH6 Mir7071-201ENSMUST00000184847 69 ntBASIC14.44□□□□□ -0.1
Nkd1Q99MH6 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.44□□□□□ -0.1
Nkd1Q99MH6 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkd1Q99MH6 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkd1Q99MH6 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkd1Q99MH6 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkd1Q99MH6 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkd1Q99MH6 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkd1Q99MH6 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.44□□□□□ -0.1
Nkd1Q99MH6 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkd1Q99MH6 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkd1Q99MH6 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkd1Q99MH6 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkd1Q99MH6 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkd1Q99MH6 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.44□□□□□ -0.1
Nkd1Q99MH6 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Nkd1Q99MH6 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Nkd1Q99MH6 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkd1Q99MH6 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nkd1Q99MH6 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkd1Q99MH6 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkd1Q99MH6 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkd1Q99MH6 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Nkd1Q99MH6 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkd1Q99MH6 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkd1Q99MH6 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Nkd1Q99MH6 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nkd1Q99MH6 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Nkd1Q99MH6 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.43□□□□□ -0.1
Nkd1Q99MH6 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Nkd1Q99MH6 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Nkd1Q99MH6 Gm44454-201ENSMUST00000198541 138 ntBASIC14.43□□□□□ -0.1
Nkd1Q99MH6 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Nkd1Q99MH6 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Nkd1Q99MH6 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.43□□□□□ -0.1
Nkd1Q99MH6 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.43□□□□□ -0.1
Nkd1Q99MH6 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Nkd1Q99MH6 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkd1Q99MH6 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkd1Q99MH6 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkd1Q99MH6 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nkd1Q99MH6 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkd1Q99MH6 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkd1Q99MH6 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Nkd1Q99MH6 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkd1Q99MH6 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkd1Q99MH6 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkd1Q99MH6 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.42□□□□□ -0.1
Nkd1Q99MH6 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkd1Q99MH6 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Nkd1Q99MH6 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.42□□□□□ -0.1
Nkd1Q99MH6 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkd1Q99MH6 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Nkd1Q99MH6 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nkd1Q99MH6 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nkd1Q99MH6 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkd1Q99MH6 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkd1Q99MH6 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nkd1Q99MH6 Mir3081-201ENSMUST00000175305 84 ntBASIC14.42□□□□□ -0.1
Nkd1Q99MH6 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nkd1Q99MH6 Gm9172-201ENSMUST00000212092 954 ntBASIC14.42□□□□□ -0.1
Nkd1Q99MH6 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkd1Q99MH6 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Nkd1Q99MH6 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkd1Q99MH6 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.42□□□□□ -0.1
Nkd1Q99MH6 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkd1Q99MH6 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.42□□□□□ -0.1
Nkd1Q99MH6 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Nkd1Q99MH6 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkd1Q99MH6 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkd1Q99MH6 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkd1Q99MH6 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.41□□□□□ -0.1
Nkd1Q99MH6 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkd1Q99MH6 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Nkd1Q99MH6 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkd1Q99MH6 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkd1Q99MH6 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Nkd1Q99MH6 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Nkd1Q99MH6 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkd1Q99MH6 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Nkd1Q99MH6 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.41□□□□□ -0.1
Nkd1Q99MH6 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.41□□□□□ -0.1
Nkd1Q99MH6 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkd1Q99MH6 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Nkd1Q99MH6 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.41□□□□□ -0.1
Nkd1Q99MH6 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.41□□□□□ -0.1
Nkd1Q99MH6 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkd1Q99MH6 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkd1Q99MH6 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkd1Q99MH6 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.41□□□□□ -0.1
Nkd1Q99MH6 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkd1Q99MH6 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Nkd1Q99MH6 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms