Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx6-1Q99MA9 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Nkx6-1Q99MA9 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx6-1Q99MA9 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Nkx6-1Q99MA9 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx6-1Q99MA9 Gm11543-201ENSMUST00000120758 370 ntBASIC14.3□□□□□ -0.12
Nkx6-1Q99MA9 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Nkx6-1Q99MA9 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.3□□□□□ -0.12
Nkx6-1Q99MA9 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Nkx6-1Q99MA9 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx6-1Q99MA9 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Nkx6-1Q99MA9 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14.3□□□□□ -0.12
Nkx6-1Q99MA9 Gm9824-201ENSMUST00000178707 561 ntBASIC14.3□□□□□ -0.12
Nkx6-1Q99MA9 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC14.3□□□□□ -0.12
Nkx6-1Q99MA9 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.3□□□□□ -0.12
Nkx6-1Q99MA9 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx6-1Q99MA9 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx6-1Q99MA9 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC14.3□□□□□ -0.12
Nkx6-1Q99MA9 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx6-1Q99MA9 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Nkx6-1Q99MA9 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx6-1Q99MA9 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.3□□□□□ -0.12
Nkx6-1Q99MA9 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Nkx6-1Q99MA9 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx6-1Q99MA9 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Nkx6-1Q99MA9 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx6-1Q99MA9 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx6-1Q99MA9 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx6-1Q99MA9 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx6-1Q99MA9 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.29□□□□□ -0.12
Nkx6-1Q99MA9 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx6-1Q99MA9 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx6-1Q99MA9 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx6-1Q99MA9 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx6-1Q99MA9 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx6-1Q99MA9 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.29□□□□□ -0.12
Nkx6-1Q99MA9 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx6-1Q99MA9 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Nkx6-1Q99MA9 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Nkx6-1Q99MA9 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.29□□□□□ -0.12
Nkx6-1Q99MA9 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx6-1Q99MA9 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx6-1Q99MA9 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC14.29□□□□□ -0.12
Nkx6-1Q99MA9 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.29□□□□□ -0.12
Nkx6-1Q99MA9 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx6-1Q99MA9 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx6-1Q99MA9 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Nkx6-1Q99MA9 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx6-1Q99MA9 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx6-1Q99MA9 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx6-1Q99MA9 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Nkx6-1Q99MA9 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx6-1Q99MA9 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Nkx6-1Q99MA9 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx6-1Q99MA9 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx6-1Q99MA9 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx6-1Q99MA9 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx6-1Q99MA9 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx6-1Q99MA9 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx6-1Q99MA9 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx6-1Q99MA9 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Nkx6-1Q99MA9 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx6-1Q99MA9 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx6-1Q99MA9 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.28□□□□□ -0.12
Nkx6-1Q99MA9 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx6-1Q99MA9 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Nkx6-1Q99MA9 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx6-1Q99MA9 Gm38225-201ENSMUST00000194001 393 ntBASIC14.28□□□□□ -0.12
Nkx6-1Q99MA9 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx6-1Q99MA9 Gm7730-201ENSMUST00000212486 454 ntBASIC14.28□□□□□ -0.12
Nkx6-1Q99MA9 Gm7653-201ENSMUST00000214567 508 ntBASIC14.28□□□□□ -0.12
Nkx6-1Q99MA9 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.28□□□□□ -0.12
Nkx6-1Q99MA9 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx6-1Q99MA9 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx6-1Q99MA9 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx6-1Q99MA9 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx6-1Q99MA9 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx6-1Q99MA9 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx6-1Q99MA9 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx6-1Q99MA9 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx6-1Q99MA9 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx6-1Q99MA9 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Nkx6-1Q99MA9 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Nkx6-1Q99MA9 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx6-1Q99MA9 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx6-1Q99MA9 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx6-1Q99MA9 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx6-1Q99MA9 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Nkx6-1Q99MA9 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx6-1Q99MA9 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx6-1Q99MA9 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Nkx6-1Q99MA9 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx6-1Q99MA9 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx6-1Q99MA9 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx6-1Q99MA9 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx6-1Q99MA9 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.27□□□□□ -0.12
Nkx6-1Q99MA9 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx6-1Q99MA9 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.27□□□□□ -0.13
Nkx6-1Q99MA9 Gm2810-201ENSMUST00000118681 990 ntBASIC14.27□□□□□ -0.13
Nkx6-1Q99MA9 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms