Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdk5rap3Q99LM2 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdk5rap3Q99LM2 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Cdk5rap3Q99LM2 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cdk5rap3Q99LM2 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdk5rap3Q99LM2 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.84■□□□□ 0.13
Cdk5rap3Q99LM2 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Cdk5rap3Q99LM2 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Cdk5rap3Q99LM2 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdk5rap3Q99LM2 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdk5rap3Q99LM2 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.84■□□□□ 0.13
Cdk5rap3Q99LM2 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdk5rap3Q99LM2 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdk5rap3Q99LM2 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.84■□□□□ 0.13
Cdk5rap3Q99LM2 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.84■□□□□ 0.13
Cdk5rap3Q99LM2 Gm12497-201ENSMUST00000138778 237 ntBASIC15.84■□□□□ 0.13
Cdk5rap3Q99LM2 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.84■□□□□ 0.13
Cdk5rap3Q99LM2 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cdk5rap3Q99LM2 Gm27867-201ENSMUST00000184778 125 ntBASIC15.84■□□□□ 0.13
Cdk5rap3Q99LM2 Mir7071-201ENSMUST00000184847 69 ntBASIC15.84■□□□□ 0.13
Cdk5rap3Q99LM2 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC15.84■□□□□ 0.13
Cdk5rap3Q99LM2 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cdk5rap3Q99LM2 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.84■□□□□ 0.13
Cdk5rap3Q99LM2 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdk5rap3Q99LM2 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Cdk5rap3Q99LM2 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdk5rap3Q99LM2 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdk5rap3Q99LM2 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Cdk5rap3Q99LM2 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Cdk5rap3Q99LM2 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdk5rap3Q99LM2 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdk5rap3Q99LM2 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdk5rap3Q99LM2 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.84■□□□□ 0.13
Cdk5rap3Q99LM2 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.84■□□□□ 0.13
Cdk5rap3Q99LM2 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdk5rap3Q99LM2 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdk5rap3Q99LM2 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdk5rap3Q99LM2 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Cdk5rap3Q99LM2 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cdk5rap3Q99LM2 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Cdk5rap3Q99LM2 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Cdk5rap3Q99LM2 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cdk5rap3Q99LM2 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdk5rap3Q99LM2 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.83■□□□□ 0.12
Cdk5rap3Q99LM2 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.83■□□□□ 0.12
Cdk5rap3Q99LM2 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdk5rap3Q99LM2 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdk5rap3Q99LM2 Gm4459-201ENSMUST00000118750 468 ntBASIC15.83■□□□□ 0.12
Cdk5rap3Q99LM2 Gm13836-201ENSMUST00000121159 501 ntBASIC15.83■□□□□ 0.12
Cdk5rap3Q99LM2 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.83■□□□□ 0.12
Cdk5rap3Q99LM2 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdk5rap3Q99LM2 Gm27704-201ENSMUST00000185094 107 ntBASIC15.83■□□□□ 0.12
Cdk5rap3Q99LM2 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdk5rap3Q99LM2 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.83■□□□□ 0.12
Cdk5rap3Q99LM2 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.83■□□□□ 0.12
Cdk5rap3Q99LM2 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.83■□□□□ 0.12
Cdk5rap3Q99LM2 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Cdk5rap3Q99LM2 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdk5rap3Q99LM2 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdk5rap3Q99LM2 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdk5rap3Q99LM2 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdk5rap3Q99LM2 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdk5rap3Q99LM2 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdk5rap3Q99LM2 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Cdk5rap3Q99LM2 Grk6-207ENSMUST00000225925 2769 ntBASIC15.83■□□□□ 0.12
Cdk5rap3Q99LM2 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdk5rap3Q99LM2 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdk5rap3Q99LM2 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdk5rap3Q99LM2 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Cdk5rap3Q99LM2 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdk5rap3Q99LM2 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cdk5rap3Q99LM2 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
Cdk5rap3Q99LM2 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdk5rap3Q99LM2 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdk5rap3Q99LM2 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdk5rap3Q99LM2 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdk5rap3Q99LM2 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cdk5rap3Q99LM2 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdk5rap3Q99LM2 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdk5rap3Q99LM2 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdk5rap3Q99LM2 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdk5rap3Q99LM2 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdk5rap3Q99LM2 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.82■□□□□ 0.12
Cdk5rap3Q99LM2 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdk5rap3Q99LM2 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.82■□□□□ 0.12
Cdk5rap3Q99LM2 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdk5rap3Q99LM2 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdk5rap3Q99LM2 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdk5rap3Q99LM2 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdk5rap3Q99LM2 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdk5rap3Q99LM2 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cdk5rap3Q99LM2 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.82■□□□□ 0.12
Cdk5rap3Q99LM2 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.82■□□□□ 0.12
Cdk5rap3Q99LM2 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.82■□□□□ 0.12
Cdk5rap3Q99LM2 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
Cdk5rap3Q99LM2 Gm7506-201ENSMUST00000207758 815 ntBASIC15.82■□□□□ 0.12
Cdk5rap3Q99LM2 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.82■□□□□ 0.12
Cdk5rap3Q99LM2 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdk5rap3Q99LM2 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdk5rap3Q99LM2 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms