Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.52□□□□□ -0.25
Chmp1aQ921W0 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Chmp1aQ921W0 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp1aQ921W0 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp1aQ921W0 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Chmp1aQ921W0 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp1aQ921W0 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp1aQ921W0 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp1aQ921W0 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Chmp1aQ921W0 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp1aQ921W0 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp1aQ921W0 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp1aQ921W0 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Chmp1aQ921W0 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Chmp1aQ921W0 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.51□□□□□ -0.25
Chmp1aQ921W0 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp1aQ921W0 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.51□□□□□ -0.25
Chmp1aQ921W0 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
Chmp1aQ921W0 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Chmp1aQ921W0 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp1aQ921W0 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp1aQ921W0 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp1aQ921W0 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Chmp1aQ921W0 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp1aQ921W0 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp1aQ921W0 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC13.51□□□□□ -0.25
Chmp1aQ921W0 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC13.51□□□□□ -0.25
Chmp1aQ921W0 Gm37722-201ENSMUST00000193757 208 ntBASIC13.51□□□□□ -0.25
Chmp1aQ921W0 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC13.51□□□□□ -0.25
Chmp1aQ921W0 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp1aQ921W0 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC13.51□□□□□ -0.25
Chmp1aQ921W0 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp1aQ921W0 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp1aQ921W0 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp1aQ921W0 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp1aQ921W0 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp1aQ921W0 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp1aQ921W0 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Chmp1aQ921W0 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp1aQ921W0 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Chmp1aQ921W0 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.51□□□□□ -0.25
Chmp1aQ921W0 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Chmp1aQ921W0 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp1aQ921W0 Efs-202ENSMUST00000227037 2540 ntBASIC13.51□□□□□ -0.25
Chmp1aQ921W0 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp1aQ921W0 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp1aQ921W0 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.51□□□□□ -0.25
Chmp1aQ921W0 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp1aQ921W0 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp1aQ921W0 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp1aQ921W0 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp1aQ921W0 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp1aQ921W0 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Chmp1aQ921W0 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp1aQ921W0 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp1aQ921W0 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp1aQ921W0 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp1aQ921W0 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp1aQ921W0 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC13.5□□□□□ -0.25
Chmp1aQ921W0 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC13.5□□□□□ -0.25
Chmp1aQ921W0 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.5□□□□□ -0.25
Chmp1aQ921W0 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.5□□□□□ -0.25
Chmp1aQ921W0 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp1aQ921W0 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp1aQ921W0 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp1aQ921W0 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp1aQ921W0 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp1aQ921W0 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Chmp1aQ921W0 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp1aQ921W0 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.5□□□□□ -0.25
Chmp1aQ921W0 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp1aQ921W0 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp1aQ921W0 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp1aQ921W0 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Chmp1aQ921W0 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp1aQ921W0 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp1aQ921W0 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp1aQ921W0 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp1aQ921W0 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp1aQ921W0 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Chmp1aQ921W0 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Chmp1aQ921W0 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Chmp1aQ921W0 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Chmp1aQ921W0 Gm27389-201ENSMUST00000183622 195 ntBASIC13.49□□□□□ -0.25
Chmp1aQ921W0 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp1aQ921W0 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp1aQ921W0 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp1aQ921W0 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
Chmp1aQ921W0 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Chmp1aQ921W0 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp1aQ921W0 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp1aQ921W0 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp1aQ921W0 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp1aQ921W0 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Chmp1aQ921W0 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.49□□□□□ -0.25
Chmp1aQ921W0 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Chmp1aQ921W0 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp1aQ921W0 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp1aQ921W0 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp1aQ921W0 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms