Protein–RNA interactions for Protein: Q921M3

Sf3b3, Splicing factor 3B subunit 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b3Q921M3 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sf3b3Q921M3 Klk2-ps-201ENSMUST00000205342 571 ntBASIC18.3■□□□□ 0.52
Sf3b3Q921M3 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC18.3■□□□□ 0.52
Sf3b3Q921M3 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Sf3b3Q921M3 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sf3b3Q921M3 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC18.3■□□□□ 0.52
Sf3b3Q921M3 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Sf3b3Q921M3 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sf3b3Q921M3 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Sf3b3Q921M3 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sf3b3Q921M3 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Sf3b3Q921M3 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sf3b3Q921M3 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sf3b3Q921M3 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sf3b3Q921M3 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sf3b3Q921M3 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sf3b3Q921M3 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sf3b3Q921M3 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sf3b3Q921M3 Gm13453-201ENSMUST00000118708 357 ntBASIC18.29■□□□□ 0.52
Sf3b3Q921M3 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Sf3b3Q921M3 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC18.29■□□□□ 0.52
Sf3b3Q921M3 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC18.29■□□□□ 0.52
Sf3b3Q921M3 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Sf3b3Q921M3 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sf3b3Q921M3 Gm27437-201ENSMUST00000183429 107 ntBASIC18.29■□□□□ 0.52
Sf3b3Q921M3 Mir6977-201ENSMUST00000184960 64 ntBASIC18.29■□□□□ 0.52
Sf3b3Q921M3 Gm17837-201ENSMUST00000186435 985 ntBASIC18.29■□□□□ 0.52
Sf3b3Q921M3 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC18.29■□□□□ 0.52
Sf3b3Q921M3 Gm18766-201ENSMUST00000189811 808 ntBASIC18.29■□□□□ 0.52
Sf3b3Q921M3 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Sf3b3Q921M3 AC125206.2-201ENSMUST00000217454 574 ntBASIC18.29■□□□□ 0.52
Sf3b3Q921M3 Wdyhv1-203ENSMUST00000226889 394 ntBASIC18.29■□□□□ 0.52
Sf3b3Q921M3 CT025535.1-201ENSMUST00000227172 491 ntBASIC18.29■□□□□ 0.52
Sf3b3Q921M3 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sf3b3Q921M3 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sf3b3Q921M3 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sf3b3Q921M3 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Sf3b3Q921M3 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sf3b3Q921M3 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sf3b3Q921M3 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sf3b3Q921M3 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Sf3b3Q921M3 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sf3b3Q921M3 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sf3b3Q921M3 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sf3b3Q921M3 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC18.28■□□□□ 0.52
Sf3b3Q921M3 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC18.28■□□□□ 0.52
Sf3b3Q921M3 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sf3b3Q921M3 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sf3b3Q921M3 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sf3b3Q921M3 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC18.28■□□□□ 0.52
Sf3b3Q921M3 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Sf3b3Q921M3 Gm25144-201ENSMUST00000179561 110 ntBASIC18.28■□□□□ 0.52
Sf3b3Q921M3 Gm25352-201ENSMUST00000179815 110 ntBASIC18.28■□□□□ 0.52
Sf3b3Q921M3 Gm27989-201ENSMUST00000184721 107 ntBASIC18.28■□□□□ 0.52
Sf3b3Q921M3 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sf3b3Q921M3 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sf3b3Q921M3 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC18.28■□□□□ 0.52
Sf3b3Q921M3 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sf3b3Q921M3 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sf3b3Q921M3 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC18.28■□□□□ 0.52
Sf3b3Q921M3 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sf3b3Q921M3 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Sf3b3Q921M3 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sf3b3Q921M3 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sf3b3Q921M3 Gm42466-201ENSMUST00000202099 1301 ntBASIC18.27■□□□□ 0.52
Sf3b3Q921M3 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Sf3b3Q921M3 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sf3b3Q921M3 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sf3b3Q921M3 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sf3b3Q921M3 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sf3b3Q921M3 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sf3b3Q921M3 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sf3b3Q921M3 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Sf3b3Q921M3 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Sf3b3Q921M3 Gm6888-201ENSMUST00000221983 706 ntBASIC18.27■□□□□ 0.52
Sf3b3Q921M3 AC158529.1-201ENSMUST00000223618 239 ntBASIC18.27■□□□□ 0.52
Sf3b3Q921M3 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
Sf3b3Q921M3 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC18.27■□□□□ 0.52
Sf3b3Q921M3 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sf3b3Q921M3 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sf3b3Q921M3 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sf3b3Q921M3 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sf3b3Q921M3 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.27■□□□□ 0.51
Sf3b3Q921M3 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC18.26■□□□□ 0.51
Sf3b3Q921M3 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sf3b3Q921M3 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC18.26■□□□□ 0.51
Sf3b3Q921M3 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sf3b3Q921M3 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Sf3b3Q921M3 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sf3b3Q921M3 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sf3b3Q921M3 Gm6539-201ENSMUST00000119157 1064 ntBASIC18.26■□□□□ 0.51
Sf3b3Q921M3 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sf3b3Q921M3 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sf3b3Q921M3 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sf3b3Q921M3 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sf3b3Q921M3 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Sf3b3Q921M3 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sf3b3Q921M3 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Sf3b3Q921M3 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sf3b3Q921M3 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms