Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.23■□□□□ 0.19
Pcdha9Q91Y11 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdha9Q91Y11 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdha9Q91Y11 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Pcdha9Q91Y11 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdha9Q91Y11 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Pcdha9Q91Y11 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdha9Q91Y11 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Pcdha9Q91Y11 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.23■□□□□ 0.19
Pcdha9Q91Y11 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Pcdha9Q91Y11 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdha9Q91Y11 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdha9Q91Y11 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdha9Q91Y11 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdha9Q91Y11 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.22■□□□□ 0.19
Pcdha9Q91Y11 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.22■□□□□ 0.19
Pcdha9Q91Y11 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdha9Q91Y11 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdha9Q91Y11 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Pcdha9Q91Y11 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdha9Q91Y11 Gm8242-201ENSMUST00000193029 1420 ntBASIC16.22■□□□□ 0.19
Pcdha9Q91Y11 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdha9Q91Y11 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdha9Q91Y11 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.22■□□□□ 0.19
Pcdha9Q91Y11 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.22■□□□□ 0.19
Pcdha9Q91Y11 Gm18246-201ENSMUST00000221023 728 ntBASIC16.22■□□□□ 0.19
Pcdha9Q91Y11 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdha9Q91Y11 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Pcdha9Q91Y11 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdha9Q91Y11 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdha9Q91Y11 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdha9Q91Y11 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdha9Q91Y11 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdha9Q91Y11 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdha9Q91Y11 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdha9Q91Y11 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdha9Q91Y11 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdha9Q91Y11 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Pcdha9Q91Y11 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdha9Q91Y11 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdha9Q91Y11 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdha9Q91Y11 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdha9Q91Y11 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdha9Q91Y11 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdha9Q91Y11 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdha9Q91Y11 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Pcdha9Q91Y11 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Pcdha9Q91Y11 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdha9Q91Y11 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdha9Q91Y11 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdha9Q91Y11 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdha9Q91Y11 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdha9Q91Y11 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.21■□□□□ 0.19
Pcdha9Q91Y11 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdha9Q91Y11 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.21■□□□□ 0.19
Pcdha9Q91Y11 Psmb5-202ENSMUST00000227257 622 ntBASIC16.21■□□□□ 0.19
Pcdha9Q91Y11 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdha9Q91Y11 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdha9Q91Y11 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdha9Q91Y11 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdha9Q91Y11 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdha9Q91Y11 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.21■□□□□ 0.19
Pcdha9Q91Y11 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pcdha9Q91Y11 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pcdha9Q91Y11 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
Pcdha9Q91Y11 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Pcdha9Q91Y11 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdha9Q91Y11 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdha9Q91Y11 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdha9Q91Y11 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdha9Q91Y11 Celf4-206ENSMUST00000224553 1729 ntBASIC16.2■□□□□ 0.18
Pcdha9Q91Y11 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdha9Q91Y11 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdha9Q91Y11 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC16.2■□□□□ 0.18
Pcdha9Q91Y11 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdha9Q91Y11 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdha9Q91Y11 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.2■□□□□ 0.18
Pcdha9Q91Y11 Gm14140-201ENSMUST00000119999 995 ntBASIC16.2■□□□□ 0.18
Pcdha9Q91Y11 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdha9Q91Y11 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdha9Q91Y11 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdha9Q91Y11 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Pcdha9Q91Y11 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdha9Q91Y11 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.2■□□□□ 0.18
Pcdha9Q91Y11 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdha9Q91Y11 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdha9Q91Y11 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdha9Q91Y11 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdha9Q91Y11 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.2■□□□□ 0.18
Pcdha9Q91Y11 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdha9Q91Y11 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdha9Q91Y11 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdha9Q91Y11 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Pcdha9Q91Y11 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdha9Q91Y11 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Pcdha9Q91Y11 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdha9Q91Y11 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdha9Q91Y11 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdha9Q91Y11 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.19■□□□□ 0.18
Pcdha9Q91Y11 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms