Protein–RNA interactions for Protein: Q91Y06

Pcdhb13, Protocadherin beta 13, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb13Q91Y06 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb13Q91Y06 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Pcdhb13Q91Y06 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb13Q91Y06 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb13Q91Y06 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb13Q91Y06 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb13Q91Y06 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb13Q91Y06 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb13Q91Y06 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb13Q91Y06 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb13Q91Y06 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb13Q91Y06 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb13Q91Y06 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Pcdhb13Q91Y06 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb13Q91Y06 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb13Q91Y06 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb13Q91Y06 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Pcdhb13Q91Y06 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb13Q91Y06 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.41■□□□□ 0.06
Pcdhb13Q91Y06 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb13Q91Y06 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb13Q91Y06 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb13Q91Y06 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.41■□□□□ 0.06
Pcdhb13Q91Y06 Gm13418-201ENSMUST00000119097 944 ntBASIC15.41■□□□□ 0.06
Pcdhb13Q91Y06 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.41■□□□□ 0.06
Pcdhb13Q91Y06 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.41■□□□□ 0.06
Pcdhb13Q91Y06 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.41■□□□□ 0.06
Pcdhb13Q91Y06 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb13Q91Y06 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb13Q91Y06 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb13Q91Y06 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb13Q91Y06 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb13Q91Y06 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb13Q91Y06 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb13Q91Y06 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Pcdhb13Q91Y06 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb13Q91Y06 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Pcdhb13Q91Y06 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb13Q91Y06 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb13Q91Y06 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb13Q91Y06 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb13Q91Y06 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb13Q91Y06 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb13Q91Y06 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Pcdhb13Q91Y06 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.4■□□□□ 0.06
Pcdhb13Q91Y06 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb13Q91Y06 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.4■□□□□ 0.06
Pcdhb13Q91Y06 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb13Q91Y06 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb13Q91Y06 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Pcdhb13Q91Y06 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb13Q91Y06 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb13Q91Y06 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Pcdhb13Q91Y06 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb13Q91Y06 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb13Q91Y06 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb13Q91Y06 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb13Q91Y06 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb13Q91Y06 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.4■□□□□ 0.06
Pcdhb13Q91Y06 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.39■□□□□ 0.06
Pcdhb13Q91Y06 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb13Q91Y06 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb13Q91Y06 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb13Q91Y06 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Pcdhb13Q91Y06 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.39■□□□□ 0.05
Pcdhb13Q91Y06 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Pcdhb13Q91Y06 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb13Q91Y06 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb13Q91Y06 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb13Q91Y06 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb13Q91Y06 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb13Q91Y06 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb13Q91Y06 Gm24589-201ENSMUST00000116692 94 ntBASIC15.39■□□□□ 0.05
Pcdhb13Q91Y06 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.39■□□□□ 0.05
Pcdhb13Q91Y06 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC15.39■□□□□ 0.05
Pcdhb13Q91Y06 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.39■□□□□ 0.05
Pcdhb13Q91Y06 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.39■□□□□ 0.05
Pcdhb13Q91Y06 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.39■□□□□ 0.05
Pcdhb13Q91Y06 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb13Q91Y06 Gm10819-201ENSMUST00000099988 561 ntBASIC15.39■□□□□ 0.05
Pcdhb13Q91Y06 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb13Q91Y06 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Pcdhb13Q91Y06 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.39■□□□□ 0.05
Pcdhb13Q91Y06 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb13Q91Y06 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Pcdhb13Q91Y06 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb13Q91Y06 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.39■□□□□ 0.05
Pcdhb13Q91Y06 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb13Q91Y06 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb13Q91Y06 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb13Q91Y06 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Pcdhb13Q91Y06 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb13Q91Y06 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb13Q91Y06 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Pcdhb13Q91Y06 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb13Q91Y06 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb13Q91Y06 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb13Q91Y06 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb13Q91Y06 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb13Q91Y06 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms