Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Pcdhb6Q91XZ4 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.69■□□□□ 0.1
Pcdhb6Q91XZ4 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb6Q91XZ4 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb6Q91XZ4 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.69■□□□□ 0.1
Pcdhb6Q91XZ4 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Pcdhb6Q91XZ4 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb6Q91XZ4 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb6Q91XZ4 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Pcdhb6Q91XZ4 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb6Q91XZ4 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb6Q91XZ4 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.68■□□□□ 0.1
Pcdhb6Q91XZ4 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb6Q91XZ4 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb6Q91XZ4 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb6Q91XZ4 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb6Q91XZ4 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Pcdhb6Q91XZ4 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb6Q91XZ4 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.68■□□□□ 0.1
Pcdhb6Q91XZ4 Gm28659-201ENSMUST00000188013 759 ntBASIC15.68■□□□□ 0.1
Pcdhb6Q91XZ4 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.68■□□□□ 0.1
Pcdhb6Q91XZ4 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.68■□□□□ 0.1
Pcdhb6Q91XZ4 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
Pcdhb6Q91XZ4 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb6Q91XZ4 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.68■□□□□ 0.1
Pcdhb6Q91XZ4 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.68■□□□□ 0.1
Pcdhb6Q91XZ4 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb6Q91XZ4 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb6Q91XZ4 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb6Q91XZ4 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb6Q91XZ4 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb6Q91XZ4 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb6Q91XZ4 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Pcdhb6Q91XZ4 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Pcdhb6Q91XZ4 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb6Q91XZ4 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb6Q91XZ4 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb6Q91XZ4 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Pcdhb6Q91XZ4 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Pcdhb6Q91XZ4 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Pcdhb6Q91XZ4 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Pcdhb6Q91XZ4 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb6Q91XZ4 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb6Q91XZ4 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb6Q91XZ4 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb6Q91XZ4 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb6Q91XZ4 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb6Q91XZ4 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.67■□□□□ 0.1
Pcdhb6Q91XZ4 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb6Q91XZ4 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.67■□□□□ 0.1
Pcdhb6Q91XZ4 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.67■□□□□ 0.1
Pcdhb6Q91XZ4 AV026068-213ENSMUST00000223675 1171 ntBASIC15.67■□□□□ 0.1
Pcdhb6Q91XZ4 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Pcdhb6Q91XZ4 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb6Q91XZ4 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb6Q91XZ4 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb6Q91XZ4 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb6Q91XZ4 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb6Q91XZ4 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.67■□□□□ 0.1
Pcdhb6Q91XZ4 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb6Q91XZ4 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Pcdhb6Q91XZ4 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb6Q91XZ4 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb6Q91XZ4 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb6Q91XZ4 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb6Q91XZ4 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb6Q91XZ4 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb6Q91XZ4 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb6Q91XZ4 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb6Q91XZ4 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb6Q91XZ4 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.67■□□□□ 0.1
Pcdhb6Q91XZ4 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb6Q91XZ4 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb6Q91XZ4 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb6Q91XZ4 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb6Q91XZ4 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb6Q91XZ4 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb6Q91XZ4 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb6Q91XZ4 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb6Q91XZ4 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Pcdhb6Q91XZ4 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.66■□□□□ 0.1
Pcdhb6Q91XZ4 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb6Q91XZ4 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb6Q91XZ4 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb6Q91XZ4 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.66■□□□□ 0.1
Pcdhb6Q91XZ4 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb6Q91XZ4 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb6Q91XZ4 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb6Q91XZ4 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb6Q91XZ4 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb6Q91XZ4 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb6Q91XZ4 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb6Q91XZ4 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Pcdhb6Q91XZ4 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb6Q91XZ4 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb6Q91XZ4 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.65■□□□□ 0.1
Pcdhb6Q91XZ4 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Pcdhb6Q91XZ4 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Pcdhb6Q91XZ4 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb6Q91XZ4 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms