Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb8Q91XZ2 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.95□□□□□ -0.02
Pcdhb8Q91XZ2 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.95□□□□□ -0.02
Pcdhb8Q91XZ2 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb8Q91XZ2 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb8Q91XZ2 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb8Q91XZ2 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb8Q91XZ2 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb8Q91XZ2 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb8Q91XZ2 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb8Q91XZ2 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb8Q91XZ2 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb8Q91XZ2 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb8Q91XZ2 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Pcdhb8Q91XZ2 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Pcdhb8Q91XZ2 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.94□□□□□ -0.02
Pcdhb8Q91XZ2 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb8Q91XZ2 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb8Q91XZ2 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb8Q91XZ2 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Pcdhb8Q91XZ2 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb8Q91XZ2 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb8Q91XZ2 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb8Q91XZ2 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb8Q91XZ2 Gm15358-201ENSMUST00000119249 520 ntBASIC14.94□□□□□ -0.02
Pcdhb8Q91XZ2 Gm9103-201ENSMUST00000119371 405 ntBASIC14.94□□□□□ -0.02
Pcdhb8Q91XZ2 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.94□□□□□ -0.02
Pcdhb8Q91XZ2 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb8Q91XZ2 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Pcdhb8Q91XZ2 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.94□□□□□ -0.02
Pcdhb8Q91XZ2 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.94□□□□□ -0.02
Pcdhb8Q91XZ2 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.94□□□□□ -0.02
Pcdhb8Q91XZ2 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb8Q91XZ2 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb8Q91XZ2 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb8Q91XZ2 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb8Q91XZ2 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb8Q91XZ2 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.94□□□□□ -0.02
Pcdhb8Q91XZ2 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb8Q91XZ2 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb8Q91XZ2 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb8Q91XZ2 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb8Q91XZ2 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.94□□□□□ -0.02
Pcdhb8Q91XZ2 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb8Q91XZ2 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb8Q91XZ2 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb8Q91XZ2 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb8Q91XZ2 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Pcdhb8Q91XZ2 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb8Q91XZ2 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb8Q91XZ2 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb8Q91XZ2 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb8Q91XZ2 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb8Q91XZ2 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb8Q91XZ2 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb8Q91XZ2 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Pcdhb8Q91XZ2 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb8Q91XZ2 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb8Q91XZ2 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
Pcdhb8Q91XZ2 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.93□□□□□ -0.02
Pcdhb8Q91XZ2 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb8Q91XZ2 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Pcdhb8Q91XZ2 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.93□□□□□ -0.02
Pcdhb8Q91XZ2 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb8Q91XZ2 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.93□□□□□ -0.02
Pcdhb8Q91XZ2 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.93□□□□□ -0.02
Pcdhb8Q91XZ2 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb8Q91XZ2 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb8Q91XZ2 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
Pcdhb8Q91XZ2 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Pcdhb8Q91XZ2 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb8Q91XZ2 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb8Q91XZ2 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb8Q91XZ2 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb8Q91XZ2 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb8Q91XZ2 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb8Q91XZ2 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.92□□□□□ -0.02
Pcdhb8Q91XZ2 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb8Q91XZ2 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb8Q91XZ2 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb8Q91XZ2 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb8Q91XZ2 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb8Q91XZ2 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.92□□□□□ -0.02
Pcdhb8Q91XZ2 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb8Q91XZ2 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb8Q91XZ2 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.92□□□□□ -0.02
Pcdhb8Q91XZ2 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb8Q91XZ2 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.92□□□□□ -0.02
Pcdhb8Q91XZ2 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.92□□□□□ -0.02
Pcdhb8Q91XZ2 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb8Q91XZ2 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Pcdhb8Q91XZ2 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb8Q91XZ2 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb8Q91XZ2 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb8Q91XZ2 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb8Q91XZ2 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb8Q91XZ2 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb8Q91XZ2 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb8Q91XZ2 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.92□□□□□ -0.02
Pcdhb8Q91XZ2 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms