Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhga11Q91XY8 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhga11Q91XY8 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Pcdhga11Q91XY8 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhga11Q91XY8 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Pcdhga11Q91XY8 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhga11Q91XY8 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdhga11Q91XY8 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhga11Q91XY8 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhga11Q91XY8 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhga11Q91XY8 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhga11Q91XY8 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhga11Q91XY8 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Pcdhga11Q91XY8 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.78□□□□□ -0.04
Pcdhga11Q91XY8 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhga11Q91XY8 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Pcdhga11Q91XY8 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Pcdhga11Q91XY8 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhga11Q91XY8 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhga11Q91XY8 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Pcdhga11Q91XY8 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhga11Q91XY8 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhga11Q91XY8 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdhga11Q91XY8 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhga11Q91XY8 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhga11Q91XY8 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhga11Q91XY8 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhga11Q91XY8 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhga11Q91XY8 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhga11Q91XY8 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhga11Q91XY8 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.77□□□□□ -0.04
Pcdhga11Q91XY8 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Pcdhga11Q91XY8 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.77□□□□□ -0.04
Pcdhga11Q91XY8 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhga11Q91XY8 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhga11Q91XY8 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhga11Q91XY8 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhga11Q91XY8 Gm18622-201ENSMUST00000219361 595 ntBASIC14.77□□□□□ -0.05
Pcdhga11Q91XY8 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhga11Q91XY8 Gm7461-201ENSMUST00000058918 827 ntBASIC14.77□□□□□ -0.05
Pcdhga11Q91XY8 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhga11Q91XY8 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhga11Q91XY8 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhga11Q91XY8 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhga11Q91XY8 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhga11Q91XY8 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhga11Q91XY8 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhga11Q91XY8 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhga11Q91XY8 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhga11Q91XY8 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhga11Q91XY8 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhga11Q91XY8 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga11Q91XY8 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga11Q91XY8 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga11Q91XY8 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga11Q91XY8 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga11Q91XY8 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Pcdhga11Q91XY8 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga11Q91XY8 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.76□□□□□ -0.05
Pcdhga11Q91XY8 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Pcdhga11Q91XY8 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga11Q91XY8 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.76□□□□□ -0.05
Pcdhga11Q91XY8 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.76□□□□□ -0.05
Pcdhga11Q91XY8 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Pcdhga11Q91XY8 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga11Q91XY8 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Pcdhga11Q91XY8 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga11Q91XY8 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga11Q91XY8 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga11Q91XY8 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga11Q91XY8 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Pcdhga11Q91XY8 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.76□□□□□ -0.05
Pcdhga11Q91XY8 Gm4459-201ENSMUST00000118750 468 ntBASIC14.76□□□□□ -0.05
Pcdhga11Q91XY8 Gm12895-201ENSMUST00000122214 226 ntBASIC14.76□□□□□ -0.05
Pcdhga11Q91XY8 Gm27867-201ENSMUST00000184778 125 ntBASIC14.76□□□□□ -0.05
Pcdhga11Q91XY8 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.76□□□□□ -0.05
Pcdhga11Q91XY8 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.76□□□□□ -0.05
Pcdhga11Q91XY8 Gm8655-201ENSMUST00000221159 852 ntBASIC14.76□□□□□ -0.05
Pcdhga11Q91XY8 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.76□□□□□ -0.05
Pcdhga11Q91XY8 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga11Q91XY8 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Pcdhga11Q91XY8 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga11Q91XY8 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga11Q91XY8 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga11Q91XY8 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga11Q91XY8 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga11Q91XY8 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga11Q91XY8 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga11Q91XY8 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.75□□□□□ -0.05
Pcdhga11Q91XY8 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga11Q91XY8 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga11Q91XY8 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga11Q91XY8 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga11Q91XY8 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga11Q91XY8 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga11Q91XY8 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga11Q91XY8 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Pcdhga11Q91XY8 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Pcdhga11Q91XY8 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga11Q91XY8 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms