Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhga4Q91XY4 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhga4Q91XY4 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhga4Q91XY4 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhga4Q91XY4 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhga4Q91XY4 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhga4Q91XY4 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhga4Q91XY4 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhga4Q91XY4 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.06■□□□□ 0
Pcdhga4Q91XY4 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhga4Q91XY4 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
Pcdhga4Q91XY4 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.06■□□□□ 0
Pcdhga4Q91XY4 Gm6550-201ENSMUST00000187574 993 ntBASIC15.06■□□□□ 0
Pcdhga4Q91XY4 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhga4Q91XY4 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdhga4Q91XY4 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.06■□□□□ 0
Pcdhga4Q91XY4 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhga4Q91XY4 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhga4Q91XY4 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhga4Q91XY4 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhga4Q91XY4 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhga4Q91XY4 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhga4Q91XY4 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhga4Q91XY4 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.06■□□□□ 0
Pcdhga4Q91XY4 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhga4Q91XY4 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
Pcdhga4Q91XY4 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Pcdhga4Q91XY4 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhga4Q91XY4 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdhga4Q91XY4 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdhga4Q91XY4 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.05■□□□□ 0
Pcdhga4Q91XY4 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdhga4Q91XY4 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.05■□□□□ 0
Pcdhga4Q91XY4 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdhga4Q91XY4 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdhga4Q91XY4 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdhga4Q91XY4 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdhga4Q91XY4 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Pcdhga4Q91XY4 Gm15173-201ENSMUST00000122049 433 ntBASIC15.05■□□□□ -0
Pcdhga4Q91XY4 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pcdhga4Q91XY4 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.05■□□□□ -0
Pcdhga4Q91XY4 Mir5126-201ENSMUST00000175513 77 ntBASIC15.05■□□□□ -0
Pcdhga4Q91XY4 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pcdhga4Q91XY4 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Pcdhga4Q91XY4 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pcdhga4Q91XY4 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.05■□□□□ -0
Pcdhga4Q91XY4 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhga4Q91XY4 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pcdhga4Q91XY4 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhga4Q91XY4 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pcdhga4Q91XY4 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhga4Q91XY4 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhga4Q91XY4 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pcdhga4Q91XY4 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.05■□□□□ -0
Pcdhga4Q91XY4 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pcdhga4Q91XY4 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.05■□□□□ -0
Pcdhga4Q91XY4 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Pcdhga4Q91XY4 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhga4Q91XY4 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhga4Q91XY4 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhga4Q91XY4 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhga4Q91XY4 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pcdhga4Q91XY4 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.05■□□□□ -0
Pcdhga4Q91XY4 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhga4Q91XY4 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhga4Q91XY4 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.05■□□□□ -0
Pcdhga4Q91XY4 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.05■□□□□ -0
Pcdhga4Q91XY4 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Pcdhga4Q91XY4 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhga4Q91XY4 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhga4Q91XY4 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdhga4Q91XY4 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhga4Q91XY4 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.04■□□□□ -0
Pcdhga4Q91XY4 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdhga4Q91XY4 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdhga4Q91XY4 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhga4Q91XY4 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdhga4Q91XY4 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdhga4Q91XY4 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.04■□□□□ -0
Pcdhga4Q91XY4 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.04■□□□□ -0
Pcdhga4Q91XY4 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.04■□□□□ -0
Pcdhga4Q91XY4 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Pcdhga4Q91XY4 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC15.04■□□□□ -0
Pcdhga4Q91XY4 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdhga4Q91XY4 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.04■□□□□ -0
Pcdhga4Q91XY4 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdhga4Q91XY4 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhga4Q91XY4 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdhga4Q91XY4 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Pcdhga4Q91XY4 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhga4Q91XY4 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhga4Q91XY4 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhga4Q91XY4 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhga4Q91XY4 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhga4Q91XY4 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhga4Q91XY4 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Pcdhga4Q91XY4 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Pcdhga4Q91XY4 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga4Q91XY4 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga4Q91XY4 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms