Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb11Q91UZ8 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb11Q91UZ8 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.63■□□□□ 0.09
Pcdhb11Q91UZ8 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.63■□□□□ 0.09
Pcdhb11Q91UZ8 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb11Q91UZ8 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb11Q91UZ8 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Pcdhb11Q91UZ8 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb11Q91UZ8 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb11Q91UZ8 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.63■□□□□ 0.09
Pcdhb11Q91UZ8 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.63■□□□□ 0.09
Pcdhb11Q91UZ8 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.63■□□□□ 0.09
Pcdhb11Q91UZ8 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb11Q91UZ8 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.63■□□□□ 0.09
Pcdhb11Q91UZ8 Gm18733-201ENSMUST00000173950 856 ntBASIC15.63■□□□□ 0.09
Pcdhb11Q91UZ8 Gm27628-201ENSMUST00000184911 107 ntBASIC15.63■□□□□ 0.09
Pcdhb11Q91UZ8 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.63■□□□□ 0.09
Pcdhb11Q91UZ8 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb11Q91UZ8 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb11Q91UZ8 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb11Q91UZ8 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Pcdhb11Q91UZ8 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb11Q91UZ8 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb11Q91UZ8 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Pcdhb11Q91UZ8 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb11Q91UZ8 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Pcdhb11Q91UZ8 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb11Q91UZ8 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb11Q91UZ8 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb11Q91UZ8 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb11Q91UZ8 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb11Q91UZ8 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb11Q91UZ8 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.62■□□□□ 0.09
Pcdhb11Q91UZ8 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Pcdhb11Q91UZ8 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb11Q91UZ8 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb11Q91UZ8 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb11Q91UZ8 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb11Q91UZ8 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb11Q91UZ8 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb11Q91UZ8 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb11Q91UZ8 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb11Q91UZ8 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.62■□□□□ 0.09
Pcdhb11Q91UZ8 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.62■□□□□ 0.09
Pcdhb11Q91UZ8 Gm4899-201ENSMUST00000178708 719 ntBASIC15.62■□□□□ 0.09
Pcdhb11Q91UZ8 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb11Q91UZ8 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Pcdhb11Q91UZ8 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb11Q91UZ8 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb11Q91UZ8 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb11Q91UZ8 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb11Q91UZ8 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb11Q91UZ8 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb11Q91UZ8 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb11Q91UZ8 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb11Q91UZ8 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb11Q91UZ8 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb11Q91UZ8 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.61■□□□□ 0.09
Pcdhb11Q91UZ8 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.61■□□□□ 0.09
Pcdhb11Q91UZ8 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb11Q91UZ8 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb11Q91UZ8 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb11Q91UZ8 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.61■□□□□ 0.09
Pcdhb11Q91UZ8 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.61■□□□□ 0.09
Pcdhb11Q91UZ8 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Pcdhb11Q91UZ8 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb11Q91UZ8 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb11Q91UZ8 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb11Q91UZ8 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb11Q91UZ8 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.61■□□□□ 0.09
Pcdhb11Q91UZ8 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.61■□□□□ 0.09
Pcdhb11Q91UZ8 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Pcdhb11Q91UZ8 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb11Q91UZ8 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb11Q91UZ8 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb11Q91UZ8 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb11Q91UZ8 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.61■□□□□ 0.09
Pcdhb11Q91UZ8 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.61■□□□□ 0.09
Pcdhb11Q91UZ8 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb11Q91UZ8 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb11Q91UZ8 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb11Q91UZ8 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb11Q91UZ8 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb11Q91UZ8 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb11Q91UZ8 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb11Q91UZ8 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.6■□□□□ 0.09
Pcdhb11Q91UZ8 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Pcdhb11Q91UZ8 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
Pcdhb11Q91UZ8 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb11Q91UZ8 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Pcdhb11Q91UZ8 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.6■□□□□ 0.09
Pcdhb11Q91UZ8 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb11Q91UZ8 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb11Q91UZ8 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.6■□□□□ 0.09
Pcdhb11Q91UZ8 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Pcdhb11Q91UZ8 Gm10499-201ENSMUST00000174094 934 ntBASIC15.6■□□□□ 0.09
Pcdhb11Q91UZ8 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Pcdhb11Q91UZ8 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb11Q91UZ8 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb11Q91UZ8 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms