Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Lmcd1Q8VEE1 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Lmcd1Q8VEE1 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lmcd1Q8VEE1 Gm10499-201ENSMUST00000174094 934 ntBASIC16.23■□□□□ 0.19
Lmcd1Q8VEE1 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lmcd1Q8VEE1 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lmcd1Q8VEE1 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC16.23■□□□□ 0.19
Lmcd1Q8VEE1 AC238811.1-201ENSMUST00000225302 441 ntBASIC16.23■□□□□ 0.19
Lmcd1Q8VEE1 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lmcd1Q8VEE1 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lmcd1Q8VEE1 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lmcd1Q8VEE1 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lmcd1Q8VEE1 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lmcd1Q8VEE1 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Lmcd1Q8VEE1 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.23■□□□□ 0.19
Lmcd1Q8VEE1 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lmcd1Q8VEE1 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Lmcd1Q8VEE1 Asic1-205ENSMUST00000228185 1818 ntBASIC16.23■□□□□ 0.19
Lmcd1Q8VEE1 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lmcd1Q8VEE1 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lmcd1Q8VEE1 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lmcd1Q8VEE1 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.23■□□□□ 0.19
Lmcd1Q8VEE1 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
Lmcd1Q8VEE1 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lmcd1Q8VEE1 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lmcd1Q8VEE1 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lmcd1Q8VEE1 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lmcd1Q8VEE1 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lmcd1Q8VEE1 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lmcd1Q8VEE1 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lmcd1Q8VEE1 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lmcd1Q8VEE1 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.22■□□□□ 0.19
Lmcd1Q8VEE1 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lmcd1Q8VEE1 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Lmcd1Q8VEE1 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Lmcd1Q8VEE1 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lmcd1Q8VEE1 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Lmcd1Q8VEE1 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lmcd1Q8VEE1 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Lmcd1Q8VEE1 Gm6266-201ENSMUST00000203844 806 ntBASIC16.22■□□□□ 0.19
Lmcd1Q8VEE1 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC16.22■□□□□ 0.19
Lmcd1Q8VEE1 Gm9908-201ENSMUST00000211534 448 ntBASIC16.22■□□□□ 0.19
Lmcd1Q8VEE1 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lmcd1Q8VEE1 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lmcd1Q8VEE1 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.22■□□□□ 0.19
Lmcd1Q8VEE1 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lmcd1Q8VEE1 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lmcd1Q8VEE1 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lmcd1Q8VEE1 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.21■□□□□ 0.19
Lmcd1Q8VEE1 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lmcd1Q8VEE1 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC16.21■□□□□ 0.19
Lmcd1Q8VEE1 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC16.21■□□□□ 0.19
Lmcd1Q8VEE1 Gm4204-201ENSMUST00000110798 1231 ntBASIC16.21■□□□□ 0.19
Lmcd1Q8VEE1 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lmcd1Q8VEE1 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Lmcd1Q8VEE1 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC16.21■□□□□ 0.19
Lmcd1Q8VEE1 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Lmcd1Q8VEE1 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC16.21■□□□□ 0.19
Lmcd1Q8VEE1 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC16.21■□□□□ 0.19
Lmcd1Q8VEE1 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC16.21■□□□□ 0.19
Lmcd1Q8VEE1 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Lmcd1Q8VEE1 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Lmcd1Q8VEE1 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lmcd1Q8VEE1 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lmcd1Q8VEE1 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.18
Lmcd1Q8VEE1 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Lmcd1Q8VEE1 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lmcd1Q8VEE1 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Lmcd1Q8VEE1 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lmcd1Q8VEE1 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Lmcd1Q8VEE1 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.2■□□□□ 0.18
Lmcd1Q8VEE1 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Lmcd1Q8VEE1 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lmcd1Q8VEE1 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Lmcd1Q8VEE1 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lmcd1Q8VEE1 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Lmcd1Q8VEE1 Gm12091-201ENSMUST00000146791 830 ntBASIC16.2■□□□□ 0.18
Lmcd1Q8VEE1 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Lmcd1Q8VEE1 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC16.2■□□□□ 0.18
Lmcd1Q8VEE1 Gm45668-201ENSMUST00000211271 493 ntBASIC16.2■□□□□ 0.18
Lmcd1Q8VEE1 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lmcd1Q8VEE1 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Lmcd1Q8VEE1 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lmcd1Q8VEE1 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Lmcd1Q8VEE1 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.2■□□□□ 0.18
Lmcd1Q8VEE1 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lmcd1Q8VEE1 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Lmcd1Q8VEE1 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lmcd1Q8VEE1 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lmcd1Q8VEE1 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Lmcd1Q8VEE1 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lmcd1Q8VEE1 Gm42466-201ENSMUST00000202099 1301 ntBASIC16.19■□□□□ 0.18
Lmcd1Q8VEE1 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lmcd1Q8VEE1 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lmcd1Q8VEE1 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Lmcd1Q8VEE1 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lmcd1Q8VEE1 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lmcd1Q8VEE1 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lmcd1Q8VEE1 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lmcd1Q8VEE1 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms