Protein–RNA interactions for Protein: Q8VCW2

Krt25, Keratin, type I cytoskeletal 25, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt25Q8VCW2 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Krt25Q8VCW2 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Krt25Q8VCW2 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Krt25Q8VCW2 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC18.3■□□□□ 0.52
Krt25Q8VCW2 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC18.3■□□□□ 0.52
Krt25Q8VCW2 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC18.3■□□□□ 0.52
Krt25Q8VCW2 CT943659.1-201ENSMUST00000215459 326 ntBASIC18.3■□□□□ 0.52
Krt25Q8VCW2 Thap2-203ENSMUST00000218989 527 ntBASIC18.3■□□□□ 0.52
Krt25Q8VCW2 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Krt25Q8VCW2 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC18.3■□□□□ 0.52
Krt25Q8VCW2 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Krt25Q8VCW2 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Krt25Q8VCW2 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Krt25Q8VCW2 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Krt25Q8VCW2 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Krt25Q8VCW2 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
Krt25Q8VCW2 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Krt25Q8VCW2 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Krt25Q8VCW2 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC18.3■□□□□ 0.52
Krt25Q8VCW2 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Krt25Q8VCW2 Gm5049-201ENSMUST00000195878 1590 ntBASIC18.3■□□□□ 0.52
Krt25Q8VCW2 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Krt25Q8VCW2 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Krt25Q8VCW2 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Krt25Q8VCW2 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Krt25Q8VCW2 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Krt25Q8VCW2 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Krt25Q8VCW2 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC18.29■□□□□ 0.52
Krt25Q8VCW2 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC18.29■□□□□ 0.52
Krt25Q8VCW2 Gm43073-201ENSMUST00000198200 1189 ntBASIC18.29■□□□□ 0.52
Krt25Q8VCW2 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Krt25Q8VCW2 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Krt25Q8VCW2 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Krt25Q8VCW2 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Krt25Q8VCW2 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
Krt25Q8VCW2 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Krt25Q8VCW2 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC18.28■□□□□ 0.52
Krt25Q8VCW2 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Krt25Q8VCW2 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Krt25Q8VCW2 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Krt25Q8VCW2 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Krt25Q8VCW2 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC18.28■□□□□ 0.52
Krt25Q8VCW2 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Krt25Q8VCW2 H2af-ps-201ENSMUST00000119066 295 ntBASIC18.28■□□□□ 0.52
Krt25Q8VCW2 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC18.28■□□□□ 0.52
Krt25Q8VCW2 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Krt25Q8VCW2 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Krt25Q8VCW2 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC18.28■□□□□ 0.52
Krt25Q8VCW2 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC18.28■□□□□ 0.52
Krt25Q8VCW2 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Krt25Q8VCW2 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Krt25Q8VCW2 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Krt25Q8VCW2 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Krt25Q8VCW2 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Krt25Q8VCW2 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Krt25Q8VCW2 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Krt25Q8VCW2 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Krt25Q8VCW2 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Krt25Q8VCW2 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Krt25Q8VCW2 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Krt25Q8VCW2 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Krt25Q8VCW2 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Krt25Q8VCW2 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Krt25Q8VCW2 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Krt25Q8VCW2 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Krt25Q8VCW2 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Krt25Q8VCW2 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Krt25Q8VCW2 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Krt25Q8VCW2 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC18.27■□□□□ 0.52
Krt25Q8VCW2 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC18.27■□□□□ 0.52
Krt25Q8VCW2 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Krt25Q8VCW2 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC18.27■□□□□ 0.52
Krt25Q8VCW2 Gm2213-201ENSMUST00000197485 688 ntBASIC18.27■□□□□ 0.52
Krt25Q8VCW2 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Krt25Q8VCW2 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC18.27■□□□□ 0.52
Krt25Q8VCW2 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Krt25Q8VCW2 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Krt25Q8VCW2 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Krt25Q8VCW2 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Krt25Q8VCW2 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Krt25Q8VCW2 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Krt25Q8VCW2 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC18.27■□□□□ 0.51
Krt25Q8VCW2 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Krt25Q8VCW2 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Krt25Q8VCW2 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Krt25Q8VCW2 Celf4-206ENSMUST00000224553 1729 ntBASIC18.26■□□□□ 0.51
Krt25Q8VCW2 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Krt25Q8VCW2 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Krt25Q8VCW2 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Krt25Q8VCW2 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Krt25Q8VCW2 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Krt25Q8VCW2 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Krt25Q8VCW2 Gm8242-201ENSMUST00000193029 1420 ntBASIC18.26■□□□□ 0.51
Krt25Q8VCW2 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Krt25Q8VCW2 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Krt25Q8VCW2 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC18.26■□□□□ 0.51
Krt25Q8VCW2 Gm12892-201ENSMUST00000117367 1146 ntBASIC18.26■□□□□ 0.51
Krt25Q8VCW2 Gm17271-201ENSMUST00000165535 355 ntBASIC18.26■□□□□ 0.51
Krt25Q8VCW2 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Krt25Q8VCW2 Gm27301-201ENSMUST00000184012 127 ntBASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms