Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Vps39Q8R5L3 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.34■□□□□ 0.05
Vps39Q8R5L3 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Vps39Q8R5L3 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC15.34■□□□□ 0.05
Vps39Q8R5L3 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps39Q8R5L3 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps39Q8R5L3 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps39Q8R5L3 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Vps39Q8R5L3 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Vps39Q8R5L3 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps39Q8R5L3 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Vps39Q8R5L3 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps39Q8R5L3 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Vps39Q8R5L3 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.33■□□□□ 0.05
Vps39Q8R5L3 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.05
Vps39Q8R5L3 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Vps39Q8R5L3 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Vps39Q8R5L3 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Vps39Q8R5L3 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
Vps39Q8R5L3 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps39Q8R5L3 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps39Q8R5L3 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps39Q8R5L3 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Vps39Q8R5L3 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
Vps39Q8R5L3 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Vps39Q8R5L3 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.33■□□□□ 0.04
Vps39Q8R5L3 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
Vps39Q8R5L3 Gm17807-201ENSMUST00000186869 298 ntBASIC15.33■□□□□ 0.04
Vps39Q8R5L3 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.33■□□□□ 0.04
Vps39Q8R5L3 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps39Q8R5L3 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps39Q8R5L3 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps39Q8R5L3 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps39Q8R5L3 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps39Q8R5L3 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps39Q8R5L3 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Vps39Q8R5L3 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Vps39Q8R5L3 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Vps39Q8R5L3 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Vps39Q8R5L3 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Vps39Q8R5L3 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps39Q8R5L3 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.32■□□□□ 0.04
Vps39Q8R5L3 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps39Q8R5L3 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps39Q8R5L3 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps39Q8R5L3 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps39Q8R5L3 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps39Q8R5L3 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps39Q8R5L3 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.32■□□□□ 0.04
Vps39Q8R5L3 Gm12644-201ENSMUST00000119935 606 ntBASIC15.32■□□□□ 0.04
Vps39Q8R5L3 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.32■□□□□ 0.04
Vps39Q8R5L3 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.32■□□□□ 0.04
Vps39Q8R5L3 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps39Q8R5L3 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps39Q8R5L3 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps39Q8R5L3 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps39Q8R5L3 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps39Q8R5L3 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps39Q8R5L3 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps39Q8R5L3 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.32■□□□□ 0.04
Vps39Q8R5L3 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Vps39Q8R5L3 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps39Q8R5L3 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps39Q8R5L3 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps39Q8R5L3 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vps39Q8R5L3 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vps39Q8R5L3 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps39Q8R5L3 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Vps39Q8R5L3 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps39Q8R5L3 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.31■□□□□ 0.04
Vps39Q8R5L3 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vps39Q8R5L3 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
Vps39Q8R5L3 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.31■□□□□ 0.04
Vps39Q8R5L3 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.31■□□□□ 0.04
Vps39Q8R5L3 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vps39Q8R5L3 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.31■□□□□ 0.04
Vps39Q8R5L3 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps39Q8R5L3 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.31■□□□□ 0.04
Vps39Q8R5L3 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps39Q8R5L3 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Vps39Q8R5L3 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps39Q8R5L3 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps39Q8R5L3 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Vps39Q8R5L3 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps39Q8R5L3 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Vps39Q8R5L3 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps39Q8R5L3 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps39Q8R5L3 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps39Q8R5L3 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps39Q8R5L3 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps39Q8R5L3 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.3■□□□□ 0.04
Vps39Q8R5L3 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps39Q8R5L3 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps39Q8R5L3 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps39Q8R5L3 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps39Q8R5L3 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.3■□□□□ 0.04
Vps39Q8R5L3 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vps39Q8R5L3 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps39Q8R5L3 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps39Q8R5L3 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms