Protein–RNA interactions for Protein: Q8R5K2

Usp33, Ubiquitin carboxyl-terminal hydrolase 33, mousemouse

Predictions only

Length 909 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp33Q8R5K2 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp33Q8R5K2 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp33Q8R5K2 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp33Q8R5K2 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp33Q8R5K2 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Usp33Q8R5K2 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp33Q8R5K2 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Usp33Q8R5K2 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Usp33Q8R5K2 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp33Q8R5K2 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Usp33Q8R5K2 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Usp33Q8R5K2 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Usp33Q8R5K2 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp33Q8R5K2 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Usp33Q8R5K2 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Usp33Q8R5K2 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp33Q8R5K2 AC130669.1-201ENSMUST00000228537 1672 ntBASIC17.57■□□□□ 0.4
Usp33Q8R5K2 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Usp33Q8R5K2 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp33Q8R5K2 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp33Q8R5K2 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp33Q8R5K2 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp33Q8R5K2 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp33Q8R5K2 AC157650.3-201ENSMUST00000225058 1476 ntBASIC17.56■□□□□ 0.4
Usp33Q8R5K2 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.56■□□□□ 0.4
Usp33Q8R5K2 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp33Q8R5K2 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp33Q8R5K2 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp33Q8R5K2 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp33Q8R5K2 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp33Q8R5K2 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp33Q8R5K2 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC17.56■□□□□ 0.4
Usp33Q8R5K2 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC17.56■□□□□ 0.4
Usp33Q8R5K2 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC17.56■□□□□ 0.4
Usp33Q8R5K2 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Usp33Q8R5K2 AC131710.1-201ENSMUST00000228336 990 ntBASIC17.56■□□□□ 0.4
Usp33Q8R5K2 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp33Q8R5K2 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp33Q8R5K2 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp33Q8R5K2 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Usp33Q8R5K2 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp33Q8R5K2 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp33Q8R5K2 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp33Q8R5K2 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp33Q8R5K2 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp33Q8R5K2 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp33Q8R5K2 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp33Q8R5K2 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp33Q8R5K2 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp33Q8R5K2 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp33Q8R5K2 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp33Q8R5K2 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Usp33Q8R5K2 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp33Q8R5K2 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Usp33Q8R5K2 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp33Q8R5K2 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp33Q8R5K2 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Usp33Q8R5K2 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp33Q8R5K2 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp33Q8R5K2 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Usp33Q8R5K2 Gm7336-201ENSMUST00000107041 1232 ntBASIC17.55■□□□□ 0.4
Usp33Q8R5K2 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC17.55■□□□□ 0.4
Usp33Q8R5K2 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp33Q8R5K2 Gm2272-201ENSMUST00000194903 582 ntBASIC17.55■□□□□ 0.4
Usp33Q8R5K2 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Usp33Q8R5K2 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp33Q8R5K2 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC17.55■□□□□ 0.4
Usp33Q8R5K2 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC17.55■□□□□ 0.4
Usp33Q8R5K2 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC17.55■□□□□ 0.4
Usp33Q8R5K2 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
Usp33Q8R5K2 Arhgef33-209ENSMUST00000225223 714 ntBASIC17.55■□□□□ 0.4
Usp33Q8R5K2 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp33Q8R5K2 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp33Q8R5K2 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp33Q8R5K2 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp33Q8R5K2 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp33Q8R5K2 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp33Q8R5K2 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Usp33Q8R5K2 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Usp33Q8R5K2 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp33Q8R5K2 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp33Q8R5K2 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp33Q8R5K2 Dancr-204ENSMUST00000132389 2347 ntBASIC17.54■□□□□ 0.4
Usp33Q8R5K2 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp33Q8R5K2 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Usp33Q8R5K2 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Usp33Q8R5K2 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp33Q8R5K2 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.54■□□□□ 0.4
Usp33Q8R5K2 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC17.54■□□□□ 0.4
Usp33Q8R5K2 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC17.54■□□□□ 0.4
Usp33Q8R5K2 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC17.54■□□□□ 0.4
Usp33Q8R5K2 CT030684.1-201ENSMUST00000227292 914 ntBASIC17.54■□□□□ 0.4
Usp33Q8R5K2 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Usp33Q8R5K2 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp33Q8R5K2 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp33Q8R5K2 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp33Q8R5K2 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp33Q8R5K2 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Usp33Q8R5K2 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Usp33Q8R5K2 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms