Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nudcd3Q8R1N4 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Nudcd3Q8R1N4 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nudcd3Q8R1N4 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Nudcd3Q8R1N4 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nudcd3Q8R1N4 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nudcd3Q8R1N4 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nudcd3Q8R1N4 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Nudcd3Q8R1N4 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nudcd3Q8R1N4 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nudcd3Q8R1N4 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nudcd3Q8R1N4 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nudcd3Q8R1N4 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nudcd3Q8R1N4 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC15.29■□□□□ 0.04
Nudcd3Q8R1N4 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nudcd3Q8R1N4 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC15.29■□□□□ 0.04
Nudcd3Q8R1N4 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nudcd3Q8R1N4 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nudcd3Q8R1N4 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nudcd3Q8R1N4 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nudcd3Q8R1N4 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nudcd3Q8R1N4 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nudcd3Q8R1N4 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nudcd3Q8R1N4 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Nudcd3Q8R1N4 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nudcd3Q8R1N4 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.29■□□□□ 0.04
Nudcd3Q8R1N4 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nudcd3Q8R1N4 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Nudcd3Q8R1N4 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nudcd3Q8R1N4 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nudcd3Q8R1N4 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Nudcd3Q8R1N4 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nudcd3Q8R1N4 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Nudcd3Q8R1N4 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15.29■□□□□ 0.04
Nudcd3Q8R1N4 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nudcd3Q8R1N4 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nudcd3Q8R1N4 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nudcd3Q8R1N4 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nudcd3Q8R1N4 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nudcd3Q8R1N4 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nudcd3Q8R1N4 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nudcd3Q8R1N4 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nudcd3Q8R1N4 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Nudcd3Q8R1N4 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Nudcd3Q8R1N4 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nudcd3Q8R1N4 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nudcd3Q8R1N4 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Nudcd3Q8R1N4 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Nudcd3Q8R1N4 Gm8668-201ENSMUST00000120559 1447 ntBASIC15.28■□□□□ 0.04
Nudcd3Q8R1N4 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nudcd3Q8R1N4 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nudcd3Q8R1N4 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nudcd3Q8R1N4 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.28■□□□□ 0.04
Nudcd3Q8R1N4 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.28■□□□□ 0.04
Nudcd3Q8R1N4 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Nudcd3Q8R1N4 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nudcd3Q8R1N4 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Nudcd3Q8R1N4 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nudcd3Q8R1N4 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nudcd3Q8R1N4 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Nudcd3Q8R1N4 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nudcd3Q8R1N4 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nudcd3Q8R1N4 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Nudcd3Q8R1N4 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nudcd3Q8R1N4 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nudcd3Q8R1N4 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nudcd3Q8R1N4 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nudcd3Q8R1N4 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nudcd3Q8R1N4 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nudcd3Q8R1N4 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nudcd3Q8R1N4 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nudcd3Q8R1N4 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nudcd3Q8R1N4 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nudcd3Q8R1N4 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nudcd3Q8R1N4 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nudcd3Q8R1N4 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Nudcd3Q8R1N4 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC15.27■□□□□ 0.04
Nudcd3Q8R1N4 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nudcd3Q8R1N4 Krtap5-1-202ENSMUST00000188274 742 ntBASIC15.27■□□□□ 0.04
Nudcd3Q8R1N4 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.27■□□□□ 0.04
Nudcd3Q8R1N4 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.27■□□□□ 0.04
Nudcd3Q8R1N4 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Nudcd3Q8R1N4 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Nudcd3Q8R1N4 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Nudcd3Q8R1N4 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nudcd3Q8R1N4 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nudcd3Q8R1N4 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Nudcd3Q8R1N4 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nudcd3Q8R1N4 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Nudcd3Q8R1N4 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nudcd3Q8R1N4 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nudcd3Q8R1N4 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
Nudcd3Q8R1N4 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.26■□□□□ 0.03
Nudcd3Q8R1N4 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.26■□□□□ 0.03
Nudcd3Q8R1N4 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.26■□□□□ 0.03
Nudcd3Q8R1N4 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nudcd3Q8R1N4 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nudcd3Q8R1N4 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Nudcd3Q8R1N4 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nudcd3Q8R1N4 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms