Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sf3a1Q8K4Z5 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sf3a1Q8K4Z5 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sf3a1Q8K4Z5 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sf3a1Q8K4Z5 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC18.7■□□□□ 0.58
Sf3a1Q8K4Z5 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Sf3a1Q8K4Z5 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Sf3a1Q8K4Z5 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sf3a1Q8K4Z5 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC18.69■□□□□ 0.58
Sf3a1Q8K4Z5 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC18.69■□□□□ 0.58
Sf3a1Q8K4Z5 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC18.69■□□□□ 0.58
Sf3a1Q8K4Z5 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sf3a1Q8K4Z5 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Sf3a1Q8K4Z5 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC18.69■□□□□ 0.58
Sf3a1Q8K4Z5 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sf3a1Q8K4Z5 Gm1401-201ENSMUST00000122048 772 ntBASIC18.69■□□□□ 0.58
Sf3a1Q8K4Z5 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC18.69■□□□□ 0.58
Sf3a1Q8K4Z5 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC18.69■□□□□ 0.58
Sf3a1Q8K4Z5 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC18.69■□□□□ 0.58
Sf3a1Q8K4Z5 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Sf3a1Q8K4Z5 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sf3a1Q8K4Z5 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sf3a1Q8K4Z5 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sf3a1Q8K4Z5 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sf3a1Q8K4Z5 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Sf3a1Q8K4Z5 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sf3a1Q8K4Z5 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Sf3a1Q8K4Z5 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Sf3a1Q8K4Z5 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sf3a1Q8K4Z5 Best4-ps-201ENSMUST00000129783 1380 ntBASIC18.68■□□□□ 0.58
Sf3a1Q8K4Z5 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sf3a1Q8K4Z5 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sf3a1Q8K4Z5 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sf3a1Q8K4Z5 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
Sf3a1Q8K4Z5 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sf3a1Q8K4Z5 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC18.68■□□□□ 0.58
Sf3a1Q8K4Z5 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sf3a1Q8K4Z5 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sf3a1Q8K4Z5 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sf3a1Q8K4Z5 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC18.68■□□□□ 0.58
Sf3a1Q8K4Z5 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sf3a1Q8K4Z5 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sf3a1Q8K4Z5 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Sf3a1Q8K4Z5 Gm7556-201ENSMUST00000201178 1084 ntBASIC18.68■□□□□ 0.58
Sf3a1Q8K4Z5 Gm42670-201ENSMUST00000201816 1292 ntBASIC18.68■□□□□ 0.58
Sf3a1Q8K4Z5 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC18.68■□□□□ 0.58
Sf3a1Q8K4Z5 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC18.68■□□□□ 0.58
Sf3a1Q8K4Z5 AC154222.1-201ENSMUST00000223882 475 ntBASIC18.68■□□□□ 0.58
Sf3a1Q8K4Z5 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sf3a1Q8K4Z5 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC18.68■□□□□ 0.58
Sf3a1Q8K4Z5 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sf3a1Q8K4Z5 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sf3a1Q8K4Z5 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sf3a1Q8K4Z5 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Sf3a1Q8K4Z5 Gm7901-201ENSMUST00000120430 1597 ntBASIC18.68■□□□□ 0.58
Sf3a1Q8K4Z5 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sf3a1Q8K4Z5 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Sf3a1Q8K4Z5 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sf3a1Q8K4Z5 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sf3a1Q8K4Z5 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sf3a1Q8K4Z5 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sf3a1Q8K4Z5 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sf3a1Q8K4Z5 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sf3a1Q8K4Z5 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sf3a1Q8K4Z5 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sf3a1Q8K4Z5 Gm38318-201ENSMUST00000195769 1706 ntBASIC18.67■□□□□ 0.58
Sf3a1Q8K4Z5 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sf3a1Q8K4Z5 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sf3a1Q8K4Z5 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sf3a1Q8K4Z5 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC18.67■□□□□ 0.58
Sf3a1Q8K4Z5 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sf3a1Q8K4Z5 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sf3a1Q8K4Z5 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sf3a1Q8K4Z5 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC18.67■□□□□ 0.58
Sf3a1Q8K4Z5 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sf3a1Q8K4Z5 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sf3a1Q8K4Z5 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sf3a1Q8K4Z5 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sf3a1Q8K4Z5 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sf3a1Q8K4Z5 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Sf3a1Q8K4Z5 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Sf3a1Q8K4Z5 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sf3a1Q8K4Z5 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sf3a1Q8K4Z5 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sf3a1Q8K4Z5 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Sf3a1Q8K4Z5 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sf3a1Q8K4Z5 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sf3a1Q8K4Z5 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Sf3a1Q8K4Z5 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC18.66■□□□□ 0.58
Sf3a1Q8K4Z5 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC18.66■□□□□ 0.58
Sf3a1Q8K4Z5 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sf3a1Q8K4Z5 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sf3a1Q8K4Z5 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC18.66■□□□□ 0.58
Sf3a1Q8K4Z5 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Sf3a1Q8K4Z5 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sf3a1Q8K4Z5 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sf3a1Q8K4Z5 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sf3a1Q8K4Z5 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sf3a1Q8K4Z5 Gm5184-201ENSMUST00000220417 1702 ntBASIC18.66■□□□□ 0.58
Sf3a1Q8K4Z5 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms