Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ebf4Q8K4J2 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ebf4Q8K4J2 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ebf4Q8K4J2 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
Ebf4Q8K4J2 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ebf4Q8K4J2 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Ebf4Q8K4J2 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Ebf4Q8K4J2 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Ebf4Q8K4J2 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ebf4Q8K4J2 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ebf4Q8K4J2 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
Ebf4Q8K4J2 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ebf4Q8K4J2 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ebf4Q8K4J2 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ebf4Q8K4J2 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC13.95□□□□□ -0.18
Ebf4Q8K4J2 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Ebf4Q8K4J2 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Ebf4Q8K4J2 Gm22240-201ENSMUST00000175225 82 ntBASIC13.95□□□□□ -0.18
Ebf4Q8K4J2 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ebf4Q8K4J2 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ebf4Q8K4J2 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ebf4Q8K4J2 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ebf4Q8K4J2 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ebf4Q8K4J2 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ebf4Q8K4J2 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ebf4Q8K4J2 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.95□□□□□ -0.18
Ebf4Q8K4J2 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ebf4Q8K4J2 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ebf4Q8K4J2 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ebf4Q8K4J2 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.95□□□□□ -0.18
Ebf4Q8K4J2 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ebf4Q8K4J2 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ebf4Q8K4J2 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ebf4Q8K4J2 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ebf4Q8K4J2 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ebf4Q8K4J2 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ebf4Q8K4J2 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ebf4Q8K4J2 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ebf4Q8K4J2 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ebf4Q8K4J2 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.94□□□□□ -0.18
Ebf4Q8K4J2 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ebf4Q8K4J2 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ebf4Q8K4J2 Odf3b-204ENSMUST00000227834 930 ntBASIC13.94□□□□□ -0.18
Ebf4Q8K4J2 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ebf4Q8K4J2 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ebf4Q8K4J2 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ebf4Q8K4J2 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ebf4Q8K4J2 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ebf4Q8K4J2 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ebf4Q8K4J2 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ebf4Q8K4J2 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ebf4Q8K4J2 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Ebf4Q8K4J2 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ebf4Q8K4J2 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Ebf4Q8K4J2 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ebf4Q8K4J2 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC13.93□□□□□ -0.18
Ebf4Q8K4J2 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf4Q8K4J2 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf4Q8K4J2 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf4Q8K4J2 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.93□□□□□ -0.18
Ebf4Q8K4J2 Spsb2-203ENSMUST00000112473 1322 ntBASIC13.93□□□□□ -0.18
Ebf4Q8K4J2 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf4Q8K4J2 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf4Q8K4J2 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf4Q8K4J2 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf4Q8K4J2 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf4Q8K4J2 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf4Q8K4J2 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf4Q8K4J2 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf4Q8K4J2 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC13.93□□□□□ -0.18
Ebf4Q8K4J2 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf4Q8K4J2 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC13.93□□□□□ -0.18
Ebf4Q8K4J2 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf4Q8K4J2 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf4Q8K4J2 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf4Q8K4J2 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf4Q8K4J2 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf4Q8K4J2 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf4Q8K4J2 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf4Q8K4J2 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf4Q8K4J2 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf4Q8K4J2 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf4Q8K4J2 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf4Q8K4J2 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Ebf4Q8K4J2 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf4Q8K4J2 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf4Q8K4J2 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf4Q8K4J2 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf4Q8K4J2 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf4Q8K4J2 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf4Q8K4J2 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf4Q8K4J2 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf4Q8K4J2 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf4Q8K4J2 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.92□□□□□ -0.18
Ebf4Q8K4J2 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf4Q8K4J2 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ebf4Q8K4J2 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf4Q8K4J2 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf4Q8K4J2 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf4Q8K4J2 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms