Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC15.36■□□□□ 0.05
Rtn4rl1Q8K0S5 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Rtn4rl1Q8K0S5 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn4rl1Q8K0S5 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn4rl1Q8K0S5 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn4rl1Q8K0S5 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn4rl1Q8K0S5 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn4rl1Q8K0S5 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn4rl1Q8K0S5 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn4rl1Q8K0S5 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Rtn4rl1Q8K0S5 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn4rl1Q8K0S5 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn4rl1Q8K0S5 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn4rl1Q8K0S5 AC124751.1-201ENSMUST00000222716 1408 ntBASIC15.35■□□□□ 0.05
Rtn4rl1Q8K0S5 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn4rl1Q8K0S5 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn4rl1Q8K0S5 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.35■□□□□ 0.05
Rtn4rl1Q8K0S5 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn4rl1Q8K0S5 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn4rl1Q8K0S5 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn4rl1Q8K0S5 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.35■□□□□ 0.05
Rtn4rl1Q8K0S5 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.35■□□□□ 0.05
Rtn4rl1Q8K0S5 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn4rl1Q8K0S5 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn4rl1Q8K0S5 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Rtn4rl1Q8K0S5 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn4rl1Q8K0S5 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Rtn4rl1Q8K0S5 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Rtn4rl1Q8K0S5 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn4rl1Q8K0S5 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.35■□□□□ 0.05
Rtn4rl1Q8K0S5 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn4rl1Q8K0S5 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn4rl1Q8K0S5 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Rtn4rl1Q8K0S5 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn4rl1Q8K0S5 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn4rl1Q8K0S5 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn4rl1Q8K0S5 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn4rl1Q8K0S5 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn4rl1Q8K0S5 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn4rl1Q8K0S5 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn4rl1Q8K0S5 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn4rl1Q8K0S5 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn4rl1Q8K0S5 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn4rl1Q8K0S5 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.34■□□□□ 0.05
Rtn4rl1Q8K0S5 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn4rl1Q8K0S5 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn4rl1Q8K0S5 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn4rl1Q8K0S5 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.34■□□□□ 0.05
Rtn4rl1Q8K0S5 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Rtn4rl1Q8K0S5 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn4rl1Q8K0S5 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Rtn4rl1Q8K0S5 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn4rl1Q8K0S5 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn4rl1Q8K0S5 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn4rl1Q8K0S5 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn4rl1Q8K0S5 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.34■□□□□ 0.05
Rtn4rl1Q8K0S5 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rtn4rl1Q8K0S5 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rtn4rl1Q8K0S5 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
Rtn4rl1Q8K0S5 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
Rtn4rl1Q8K0S5 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.33■□□□□ 0.05
Rtn4rl1Q8K0S5 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rtn4rl1Q8K0S5 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Rtn4rl1Q8K0S5 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rtn4rl1Q8K0S5 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC15.33■□□□□ 0.04
Rtn4rl1Q8K0S5 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Rtn4rl1Q8K0S5 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Rtn4rl1Q8K0S5 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC15.33■□□□□ 0.04
Rtn4rl1Q8K0S5 Gm15487-201ENSMUST00000122373 465 ntBASIC15.33■□□□□ 0.04
Rtn4rl1Q8K0S5 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC15.33■□□□□ 0.04
Rtn4rl1Q8K0S5 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rtn4rl1Q8K0S5 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Rtn4rl1Q8K0S5 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Rtn4rl1Q8K0S5 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.33■□□□□ 0.04
Rtn4rl1Q8K0S5 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rtn4rl1Q8K0S5 Gm7730-201ENSMUST00000212486 454 ntBASIC15.33■□□□□ 0.04
Rtn4rl1Q8K0S5 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rtn4rl1Q8K0S5 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rtn4rl1Q8K0S5 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rtn4rl1Q8K0S5 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.33■□□□□ 0.04
Rtn4rl1Q8K0S5 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rtn4rl1Q8K0S5 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Rtn4rl1Q8K0S5 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rtn4rl1Q8K0S5 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rtn4rl1Q8K0S5 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rtn4rl1Q8K0S5 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Rtn4rl1Q8K0S5 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.33■□□□□ 0.04
Rtn4rl1Q8K0S5 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rtn4rl1Q8K0S5 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rtn4rl1Q8K0S5 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Rtn4rl1Q8K0S5 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rtn4rl1Q8K0S5 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC15.32■□□□□ 0.04
Rtn4rl1Q8K0S5 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Rtn4rl1Q8K0S5 Gm27533-201ENSMUST00000183800 152 ntBASIC15.32■□□□□ 0.04
Rtn4rl1Q8K0S5 Gm7775-201ENSMUST00000218871 853 ntBASIC15.32■□□□□ 0.04
Rtn4rl1Q8K0S5 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC15.32■□□□□ 0.04
Rtn4rl1Q8K0S5 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtn4rl1Q8K0S5 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtn4rl1Q8K0S5 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtn4rl1Q8K0S5 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms