Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfwd3Q8CIK8 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rfwd3Q8CIK8 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfwd3Q8CIK8 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rfwd3Q8CIK8 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfwd3Q8CIK8 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Rfwd3Q8CIK8 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfwd3Q8CIK8 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfwd3Q8CIK8 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfwd3Q8CIK8 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfwd3Q8CIK8 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfwd3Q8CIK8 Gm7222-201ENSMUST00000117512 906 ntBASIC14.39□□□□□ -0.11
Rfwd3Q8CIK8 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.39□□□□□ -0.11
Rfwd3Q8CIK8 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfwd3Q8CIK8 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfwd3Q8CIK8 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfwd3Q8CIK8 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfwd3Q8CIK8 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rfwd3Q8CIK8 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfwd3Q8CIK8 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfwd3Q8CIK8 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfwd3Q8CIK8 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfwd3Q8CIK8 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfwd3Q8CIK8 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfwd3Q8CIK8 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfwd3Q8CIK8 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfwd3Q8CIK8 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.38□□□□□ -0.11
Rfwd3Q8CIK8 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfwd3Q8CIK8 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfwd3Q8CIK8 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Rfwd3Q8CIK8 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.38□□□□□ -0.11
Rfwd3Q8CIK8 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfwd3Q8CIK8 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfwd3Q8CIK8 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfwd3Q8CIK8 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Rfwd3Q8CIK8 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfwd3Q8CIK8 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfwd3Q8CIK8 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rfwd3Q8CIK8 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfwd3Q8CIK8 Gm14722-201ENSMUST00000118943 689 ntBASIC14.38□□□□□ -0.11
Rfwd3Q8CIK8 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.38□□□□□ -0.11
Rfwd3Q8CIK8 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rfwd3Q8CIK8 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rfwd3Q8CIK8 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.38□□□□□ -0.11
Rfwd3Q8CIK8 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.38□□□□□ -0.11
Rfwd3Q8CIK8 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rfwd3Q8CIK8 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.38□□□□□ -0.11
Rfwd3Q8CIK8 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfwd3Q8CIK8 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfwd3Q8CIK8 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.38□□□□□ -0.11
Rfwd3Q8CIK8 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.38□□□□□ -0.11
Rfwd3Q8CIK8 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.38□□□□□ -0.11
Rfwd3Q8CIK8 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfwd3Q8CIK8 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Rfwd3Q8CIK8 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfwd3Q8CIK8 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfwd3Q8CIK8 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rfwd3Q8CIK8 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfwd3Q8CIK8 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfwd3Q8CIK8 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Rfwd3Q8CIK8 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rfwd3Q8CIK8 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfwd3Q8CIK8 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfwd3Q8CIK8 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Rfwd3Q8CIK8 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfwd3Q8CIK8 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Rfwd3Q8CIK8 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Rfwd3Q8CIK8 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfwd3Q8CIK8 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfwd3Q8CIK8 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.37□□□□□ -0.11
Rfwd3Q8CIK8 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfwd3Q8CIK8 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.37□□□□□ -0.11
Rfwd3Q8CIK8 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.37□□□□□ -0.11
Rfwd3Q8CIK8 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rfwd3Q8CIK8 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.37□□□□□ -0.11
Rfwd3Q8CIK8 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfwd3Q8CIK8 Gm6550-201ENSMUST00000187574 993 ntBASIC14.37□□□□□ -0.11
Rfwd3Q8CIK8 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfwd3Q8CIK8 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfwd3Q8CIK8 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfwd3Q8CIK8 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfwd3Q8CIK8 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfwd3Q8CIK8 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfwd3Q8CIK8 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfwd3Q8CIK8 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Rfwd3Q8CIK8 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Rfwd3Q8CIK8 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.36□□□□□ -0.11
Rfwd3Q8CIK8 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfwd3Q8CIK8 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.36□□□□□ -0.11
Rfwd3Q8CIK8 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfwd3Q8CIK8 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Rfwd3Q8CIK8 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfwd3Q8CIK8 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Rfwd3Q8CIK8 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfwd3Q8CIK8 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfwd3Q8CIK8 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rfwd3Q8CIK8 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.36□□□□□ -0.11
Rfwd3Q8CIK8 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfwd3Q8CIK8 Gm15173-201ENSMUST00000122049 433 ntBASIC14.36□□□□□ -0.11
Rfwd3Q8CIK8 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms