Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc28bQ8CEG5 Gm22240-201ENSMUST00000175225 82 ntBASIC15.12■□□□□ 0.01
Ccdc28bQ8CEG5 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Ccdc28bQ8CEG5 Gm37055-201ENSMUST00000191866 133 ntBASIC15.12■□□□□ 0.01
Ccdc28bQ8CEG5 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc28bQ8CEG5 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc28bQ8CEG5 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC15.12■□□□□ 0.01
Ccdc28bQ8CEG5 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ccdc28bQ8CEG5 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc28bQ8CEG5 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc28bQ8CEG5 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc28bQ8CEG5 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Ccdc28bQ8CEG5 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc28bQ8CEG5 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc28bQ8CEG5 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ccdc28bQ8CEG5 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc28bQ8CEG5 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Ccdc28bQ8CEG5 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC15.12■□□□□ 0.01
Ccdc28bQ8CEG5 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc28bQ8CEG5 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ccdc28bQ8CEG5 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc28bQ8CEG5 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc28bQ8CEG5 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ccdc28bQ8CEG5 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC15.11■□□□□ 0.01
Ccdc28bQ8CEG5 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC15.11■□□□□ 0.01
Ccdc28bQ8CEG5 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc28bQ8CEG5 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc28bQ8CEG5 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Ccdc28bQ8CEG5 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc28bQ8CEG5 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc28bQ8CEG5 Gm18959-201ENSMUST00000208954 655 ntBASIC15.11■□□□□ 0.01
Ccdc28bQ8CEG5 Gm21559-201ENSMUST00000220638 855 ntBASIC15.11■□□□□ 0.01
Ccdc28bQ8CEG5 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc28bQ8CEG5 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Ccdc28bQ8CEG5 Gm8587-201ENSMUST00000076538 843 ntBASIC15.11■□□□□ 0.01
Ccdc28bQ8CEG5 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Ccdc28bQ8CEG5 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc28bQ8CEG5 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc28bQ8CEG5 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc28bQ8CEG5 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.11■□□□□ 0.01
Ccdc28bQ8CEG5 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc28bQ8CEG5 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc28bQ8CEG5 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc28bQ8CEG5 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc28bQ8CEG5 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc28bQ8CEG5 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ccdc28bQ8CEG5 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ccdc28bQ8CEG5 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc28bQ8CEG5 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc28bQ8CEG5 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
Ccdc28bQ8CEG5 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Ccdc28bQ8CEG5 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc28bQ8CEG5 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Ccdc28bQ8CEG5 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Ccdc28bQ8CEG5 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc28bQ8CEG5 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc28bQ8CEG5 Gm11355-201ENSMUST00000121120 306 ntBASIC15.1■□□□□ 0.01
Ccdc28bQ8CEG5 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc28bQ8CEG5 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Ccdc28bQ8CEG5 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc28bQ8CEG5 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc28bQ8CEG5 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc28bQ8CEG5 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Ccdc28bQ8CEG5 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc28bQ8CEG5 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc28bQ8CEG5 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.1■□□□□ 0.01
Ccdc28bQ8CEG5 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc28bQ8CEG5 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.1■□□□□ 0.01
Ccdc28bQ8CEG5 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc28bQ8CEG5 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc28bQ8CEG5 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc28bQ8CEG5 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc28bQ8CEG5 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc28bQ8CEG5 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Ccdc28bQ8CEG5 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Ccdc28bQ8CEG5 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.09■□□□□ 0.01
Ccdc28bQ8CEG5 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc28bQ8CEG5 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC15.09■□□□□ 0.01
Ccdc28bQ8CEG5 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc28bQ8CEG5 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc28bQ8CEG5 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc28bQ8CEG5 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc28bQ8CEG5 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc28bQ8CEG5 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc28bQ8CEG5 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc28bQ8CEG5 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.09■□□□□ 0.01
Ccdc28bQ8CEG5 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc28bQ8CEG5 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc28bQ8CEG5 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC15.09■□□□□ 0.01
Ccdc28bQ8CEG5 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.09■□□□□ 0.01
Ccdc28bQ8CEG5 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC15.09■□□□□ 0.01
Ccdc28bQ8CEG5 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.09■□□□□ 0.01
Ccdc28bQ8CEG5 Gm20472-201ENSMUST00000174403 1240 ntBASIC15.09■□□□□ 0.01
Ccdc28bQ8CEG5 AC134329.2-201ENSMUST00000217897 428 ntBASIC15.09■□□□□ 0.01
Ccdc28bQ8CEG5 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Ccdc28bQ8CEG5 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Ccdc28bQ8CEG5 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc28bQ8CEG5 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc28bQ8CEG5 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc28bQ8CEG5 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms