Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Slc46a2Q8CA03 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.69□□□□□ -0.06
Slc46a2Q8CA03 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Slc46a2Q8CA03 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.69□□□□□ -0.06
Slc46a2Q8CA03 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.69□□□□□ -0.06
Slc46a2Q8CA03 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.69□□□□□ -0.06
Slc46a2Q8CA03 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.69□□□□□ -0.06
Slc46a2Q8CA03 Gm6659-201ENSMUST00000174752 547 ntBASIC14.69□□□□□ -0.06
Slc46a2Q8CA03 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.69□□□□□ -0.06
Slc46a2Q8CA03 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.69□□□□□ -0.06
Slc46a2Q8CA03 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.69□□□□□ -0.06
Slc46a2Q8CA03 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.69□□□□□ -0.06
Slc46a2Q8CA03 Gm8825-201ENSMUST00000182565 998 ntBASIC14.69□□□□□ -0.06
Slc46a2Q8CA03 Gm4518-201ENSMUST00000182638 718 ntBASIC14.69□□□□□ -0.06
Slc46a2Q8CA03 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.69□□□□□ -0.06
Slc46a2Q8CA03 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.69□□□□□ -0.06
Slc46a2Q8CA03 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.69□□□□□ -0.06
Slc46a2Q8CA03 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.69□□□□□ -0.06
Slc46a2Q8CA03 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Slc46a2Q8CA03 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Slc46a2Q8CA03 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Slc46a2Q8CA03 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.69□□□□□ -0.06
Slc46a2Q8CA03 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.69□□□□□ -0.06
Slc46a2Q8CA03 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Slc46a2Q8CA03 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.69□□□□□ -0.06
Slc46a2Q8CA03 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.69□□□□□ -0.06
Slc46a2Q8CA03 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Slc46a2Q8CA03 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Slc46a2Q8CA03 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Slc46a2Q8CA03 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Slc46a2Q8CA03 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Slc46a2Q8CA03 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Slc46a2Q8CA03 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Slc46a2Q8CA03 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Slc46a2Q8CA03 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Slc46a2Q8CA03 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Slc46a2Q8CA03 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Slc46a2Q8CA03 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Slc46a2Q8CA03 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Slc46a2Q8CA03 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.68□□□□□ -0.06
Slc46a2Q8CA03 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Slc46a2Q8CA03 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.68□□□□□ -0.06
Slc46a2Q8CA03 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Slc46a2Q8CA03 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Slc46a2Q8CA03 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Slc46a2Q8CA03 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Slc46a2Q8CA03 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Slc46a2Q8CA03 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Slc46a2Q8CA03 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Slc46a2Q8CA03 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.68□□□□□ -0.06
Slc46a2Q8CA03 Gm18101-201ENSMUST00000215769 548 ntBASIC14.68□□□□□ -0.06
Slc46a2Q8CA03 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Slc46a2Q8CA03 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Slc46a2Q8CA03 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Slc46a2Q8CA03 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.68□□□□□ -0.06
Slc46a2Q8CA03 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Slc46a2Q8CA03 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Slc46a2Q8CA03 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Slc46a2Q8CA03 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Slc46a2Q8CA03 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Slc46a2Q8CA03 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Slc46a2Q8CA03 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Slc46a2Q8CA03 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Slc46a2Q8CA03 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Slc46a2Q8CA03 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Slc46a2Q8CA03 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Slc46a2Q8CA03 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.67□□□□□ -0.06
Slc46a2Q8CA03 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Slc46a2Q8CA03 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Slc46a2Q8CA03 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Slc46a2Q8CA03 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Slc46a2Q8CA03 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Slc46a2Q8CA03 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Slc46a2Q8CA03 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Slc46a2Q8CA03 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Slc46a2Q8CA03 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.67□□□□□ -0.06
Slc46a2Q8CA03 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Slc46a2Q8CA03 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Slc46a2Q8CA03 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Slc46a2Q8CA03 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Slc46a2Q8CA03 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Slc46a2Q8CA03 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC14.67□□□□□ -0.06
Slc46a2Q8CA03 Gm21362-201ENSMUST00000194272 928 ntBASIC14.67□□□□□ -0.06
Slc46a2Q8CA03 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.67□□□□□ -0.06
Slc46a2Q8CA03 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Slc46a2Q8CA03 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Slc46a2Q8CA03 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Slc46a2Q8CA03 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Slc46a2Q8CA03 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Slc46a2Q8CA03 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Slc46a2Q8CA03 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Slc46a2Q8CA03 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Slc46a2Q8CA03 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Slc46a2Q8CA03 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.67□□□□□ -0.06
Slc46a2Q8CA03 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Slc46a2Q8CA03 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Slc46a2Q8CA03 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Slc46a2Q8CA03 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Slc46a2Q8CA03 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Slc46a2Q8CA03 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms