Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.1■□□□□ 0.17
Uba3Q8C878 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Uba3Q8C878 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Uba3Q8C878 Gm5184-201ENSMUST00000220417 1702 ntBASIC16.1■□□□□ 0.17
Uba3Q8C878 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Uba3Q8C878 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Uba3Q8C878 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.1■□□□□ 0.17
Uba3Q8C878 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Uba3Q8C878 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Uba3Q8C878 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Uba3Q8C878 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.09■□□□□ 0.17
Uba3Q8C878 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Uba3Q8C878 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Uba3Q8C878 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Uba3Q8C878 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Uba3Q8C878 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Uba3Q8C878 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Uba3Q8C878 Gm1401-201ENSMUST00000122048 772 ntBASIC16.09■□□□□ 0.17
Uba3Q8C878 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.09■□□□□ 0.17
Uba3Q8C878 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Uba3Q8C878 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.09■□□□□ 0.17
Uba3Q8C878 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.09■□□□□ 0.17
Uba3Q8C878 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Uba3Q8C878 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Uba3Q8C878 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Uba3Q8C878 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Uba3Q8C878 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.09■□□□□ 0.17
Uba3Q8C878 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Uba3Q8C878 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Uba3Q8C878 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Uba3Q8C878 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Uba3Q8C878 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.09■□□□□ 0.17
Uba3Q8C878 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Uba3Q8C878 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Uba3Q8C878 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Uba3Q8C878 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.08■□□□□ 0.17
Uba3Q8C878 Asic1-205ENSMUST00000228185 1818 ntBASIC16.08■□□□□ 0.17
Uba3Q8C878 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Uba3Q8C878 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.08■□□□□ 0.17
Uba3Q8C878 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Uba3Q8C878 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Uba3Q8C878 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.08■□□□□ 0.16
Uba3Q8C878 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.08■□□□□ 0.16
Uba3Q8C878 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Uba3Q8C878 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Uba3Q8C878 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Uba3Q8C878 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.08■□□□□ 0.16
Uba3Q8C878 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.08■□□□□ 0.16
Uba3Q8C878 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.08■□□□□ 0.16
Uba3Q8C878 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Uba3Q8C878 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Uba3Q8C878 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Uba3Q8C878 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Uba3Q8C878 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Uba3Q8C878 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Uba3Q8C878 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Uba3Q8C878 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Uba3Q8C878 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Uba3Q8C878 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Uba3Q8C878 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Uba3Q8C878 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Uba3Q8C878 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Uba3Q8C878 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Uba3Q8C878 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Uba3Q8C878 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
Uba3Q8C878 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.07■□□□□ 0.16
Uba3Q8C878 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.07■□□□□ 0.16
Uba3Q8C878 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.07■□□□□ 0.16
Uba3Q8C878 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.07■□□□□ 0.16
Uba3Q8C878 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.07■□□□□ 0.16
Uba3Q8C878 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.07■□□□□ 0.16
Uba3Q8C878 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Uba3Q8C878 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Uba3Q8C878 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Uba3Q8C878 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Uba3Q8C878 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.07■□□□□ 0.16
Uba3Q8C878 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Uba3Q8C878 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Uba3Q8C878 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Uba3Q8C878 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Uba3Q8C878 BC037039-201ENSMUST00000192003 2205 ntBASIC16.07■□□□□ 0.16
Uba3Q8C878 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Uba3Q8C878 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Uba3Q8C878 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.07■□□□□ 0.16
Uba3Q8C878 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Uba3Q8C878 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Uba3Q8C878 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Uba3Q8C878 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Uba3Q8C878 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Uba3Q8C878 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Uba3Q8C878 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Uba3Q8C878 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.06■□□□□ 0.16
Uba3Q8C878 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.06■□□□□ 0.16
Uba3Q8C878 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.06■□□□□ 0.16
Uba3Q8C878 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Uba3Q8C878 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
Uba3Q8C878 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Uba3Q8C878 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Uba3Q8C878 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.06■□□□□ 0.16
Uba3Q8C878 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms