Protein–RNA interactions for Protein: Q8C0Y0

Ppp4r4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, mousemouse

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp4r4Q8C0Y0 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ppp4r4Q8C0Y0 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.47■□□□□ 0.07
Ppp4r4Q8C0Y0 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
Ppp4r4Q8C0Y0 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Ppp4r4Q8C0Y0 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.47■□□□□ 0.07
Ppp4r4Q8C0Y0 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ppp4r4Q8C0Y0 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.47■□□□□ 0.07
Ppp4r4Q8C0Y0 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.47■□□□□ 0.07
Ppp4r4Q8C0Y0 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.47■□□□□ 0.07
Ppp4r4Q8C0Y0 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ppp4r4Q8C0Y0 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ppp4r4Q8C0Y0 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ppp4r4Q8C0Y0 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ppp4r4Q8C0Y0 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ppp4r4Q8C0Y0 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ppp4r4Q8C0Y0 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ppp4r4Q8C0Y0 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.47■□□□□ 0.07
Ppp4r4Q8C0Y0 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ppp4r4Q8C0Y0 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Ppp4r4Q8C0Y0 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ppp4r4Q8C0Y0 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Ppp4r4Q8C0Y0 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.46■□□□□ 0.07
Ppp4r4Q8C0Y0 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ppp4r4Q8C0Y0 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ppp4r4Q8C0Y0 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ppp4r4Q8C0Y0 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ppp4r4Q8C0Y0 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ppp4r4Q8C0Y0 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ppp4r4Q8C0Y0 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC15.46■□□□□ 0.07
Ppp4r4Q8C0Y0 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ppp4r4Q8C0Y0 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ppp4r4Q8C0Y0 Gm25990-201ENSMUST00000102440 86 ntBASIC15.46■□□□□ 0.07
Ppp4r4Q8C0Y0 Gm7862-201ENSMUST00000121461 292 ntBASIC15.46■□□□□ 0.07
Ppp4r4Q8C0Y0 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ppp4r4Q8C0Y0 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ppp4r4Q8C0Y0 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Ppp4r4Q8C0Y0 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.46■□□□□ 0.07
Ppp4r4Q8C0Y0 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ppp4r4Q8C0Y0 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.46■□□□□ 0.07
Ppp4r4Q8C0Y0 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Ppp4r4Q8C0Y0 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ppp4r4Q8C0Y0 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ppp4r4Q8C0Y0 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ppp4r4Q8C0Y0 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ppp4r4Q8C0Y0 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ppp4r4Q8C0Y0 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ppp4r4Q8C0Y0 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ppp4r4Q8C0Y0 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.06
Ppp4r4Q8C0Y0 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ppp4r4Q8C0Y0 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.06
Ppp4r4Q8C0Y0 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
Ppp4r4Q8C0Y0 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.46■□□□□ 0.06
Ppp4r4Q8C0Y0 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ppp4r4Q8C0Y0 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ppp4r4Q8C0Y0 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
Ppp4r4Q8C0Y0 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
Ppp4r4Q8C0Y0 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ppp4r4Q8C0Y0 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ppp4r4Q8C0Y0 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ppp4r4Q8C0Y0 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ppp4r4Q8C0Y0 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.45■□□□□ 0.06
Ppp4r4Q8C0Y0 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
Ppp4r4Q8C0Y0 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Ppp4r4Q8C0Y0 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ppp4r4Q8C0Y0 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ppp4r4Q8C0Y0 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.45■□□□□ 0.06
Ppp4r4Q8C0Y0 Gm11780-201ENSMUST00000136880 516 ntBASIC15.45■□□□□ 0.06
Ppp4r4Q8C0Y0 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ppp4r4Q8C0Y0 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.45■□□□□ 0.06
Ppp4r4Q8C0Y0 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ppp4r4Q8C0Y0 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ppp4r4Q8C0Y0 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ppp4r4Q8C0Y0 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.45■□□□□ 0.06
Ppp4r4Q8C0Y0 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ppp4r4Q8C0Y0 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Ppp4r4Q8C0Y0 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ppp4r4Q8C0Y0 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ppp4r4Q8C0Y0 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.45■□□□□ 0.06
Ppp4r4Q8C0Y0 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ppp4r4Q8C0Y0 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ppp4r4Q8C0Y0 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
Ppp4r4Q8C0Y0 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ppp4r4Q8C0Y0 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ppp4r4Q8C0Y0 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ppp4r4Q8C0Y0 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ppp4r4Q8C0Y0 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Ppp4r4Q8C0Y0 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ppp4r4Q8C0Y0 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ppp4r4Q8C0Y0 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Ppp4r4Q8C0Y0 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ppp4r4Q8C0Y0 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ppp4r4Q8C0Y0 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ppp4r4Q8C0Y0 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.44■□□□□ 0.06
Ppp4r4Q8C0Y0 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ppp4r4Q8C0Y0 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Ppp4r4Q8C0Y0 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ppp4r4Q8C0Y0 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Ppp4r4Q8C0Y0 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ppp4r4Q8C0Y0 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ppp4r4Q8C0Y0 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms