Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim47Q8C0E3 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC16.9■□□□□ 0.3
Trim47Q8C0E3 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.9■□□□□ 0.3
Trim47Q8C0E3 Mir7036b-201ENSMUST00000184791 63 ntBASIC16.9■□□□□ 0.3
Trim47Q8C0E3 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim47Q8C0E3 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.9■□□□□ 0.3
Trim47Q8C0E3 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim47Q8C0E3 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim47Q8C0E3 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
Trim47Q8C0E3 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim47Q8C0E3 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim47Q8C0E3 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.9■□□□□ 0.3
Trim47Q8C0E3 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trim47Q8C0E3 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.89■□□□□ 0.3
Trim47Q8C0E3 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim47Q8C0E3 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim47Q8C0E3 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.89■□□□□ 0.29
Trim47Q8C0E3 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Trim47Q8C0E3 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim47Q8C0E3 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim47Q8C0E3 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim47Q8C0E3 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim47Q8C0E3 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Trim47Q8C0E3 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim47Q8C0E3 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.89■□□□□ 0.29
Trim47Q8C0E3 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim47Q8C0E3 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC16.89■□□□□ 0.29
Trim47Q8C0E3 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC16.89■□□□□ 0.29
Trim47Q8C0E3 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC16.89■□□□□ 0.29
Trim47Q8C0E3 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim47Q8C0E3 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim47Q8C0E3 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim47Q8C0E3 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim47Q8C0E3 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim47Q8C0E3 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim47Q8C0E3 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Trim47Q8C0E3 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim47Q8C0E3 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim47Q8C0E3 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim47Q8C0E3 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim47Q8C0E3 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim47Q8C0E3 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim47Q8C0E3 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim47Q8C0E3 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC16.89■□□□□ 0.29
Trim47Q8C0E3 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim47Q8C0E3 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim47Q8C0E3 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim47Q8C0E3 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Trim47Q8C0E3 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim47Q8C0E3 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim47Q8C0E3 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim47Q8C0E3 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim47Q8C0E3 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim47Q8C0E3 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim47Q8C0E3 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim47Q8C0E3 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim47Q8C0E3 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim47Q8C0E3 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
Trim47Q8C0E3 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim47Q8C0E3 Gm12892-201ENSMUST00000117367 1146 ntBASIC16.88■□□□□ 0.29
Trim47Q8C0E3 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.88■□□□□ 0.29
Trim47Q8C0E3 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC16.88■□□□□ 0.29
Trim47Q8C0E3 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.88■□□□□ 0.29
Trim47Q8C0E3 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim47Q8C0E3 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
Trim47Q8C0E3 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim47Q8C0E3 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Trim47Q8C0E3 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim47Q8C0E3 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC16.88■□□□□ 0.29
Trim47Q8C0E3 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim47Q8C0E3 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim47Q8C0E3 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim47Q8C0E3 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim47Q8C0E3 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim47Q8C0E3 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim47Q8C0E3 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim47Q8C0E3 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim47Q8C0E3 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim47Q8C0E3 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim47Q8C0E3 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim47Q8C0E3 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.87■□□□□ 0.29
Trim47Q8C0E3 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim47Q8C0E3 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim47Q8C0E3 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim47Q8C0E3 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.87■□□□□ 0.29
Trim47Q8C0E3 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim47Q8C0E3 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC16.87■□□□□ 0.29
Trim47Q8C0E3 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim47Q8C0E3 Gm4913-201ENSMUST00000117075 1290 ntBASIC16.87■□□□□ 0.29
Trim47Q8C0E3 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim47Q8C0E3 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Trim47Q8C0E3 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Trim47Q8C0E3 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim47Q8C0E3 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim47Q8C0E3 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
Trim47Q8C0E3 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC16.87■□□□□ 0.29
Trim47Q8C0E3 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.87■□□□□ 0.29
Trim47Q8C0E3 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.87■□□□□ 0.29
Trim47Q8C0E3 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim47Q8C0E3 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms