Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.46■□□□□ 0.07
Sh3rf2Q8BZT2 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Sh3rf2Q8BZT2 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Sh3rf2Q8BZT2 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Sh3rf2Q8BZT2 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Sh3rf2Q8BZT2 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sh3rf2Q8BZT2 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sh3rf2Q8BZT2 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sh3rf2Q8BZT2 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
Sh3rf2Q8BZT2 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sh3rf2Q8BZT2 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sh3rf2Q8BZT2 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Sh3rf2Q8BZT2 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.45■□□□□ 0.06
Sh3rf2Q8BZT2 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Sh3rf2Q8BZT2 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sh3rf2Q8BZT2 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sh3rf2Q8BZT2 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sh3rf2Q8BZT2 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sh3rf2Q8BZT2 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
Sh3rf2Q8BZT2 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sh3rf2Q8BZT2 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC15.45■□□□□ 0.06
Sh3rf2Q8BZT2 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.45■□□□□ 0.06
Sh3rf2Q8BZT2 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC15.45■□□□□ 0.06
Sh3rf2Q8BZT2 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.45■□□□□ 0.06
Sh3rf2Q8BZT2 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC15.45■□□□□ 0.06
Sh3rf2Q8BZT2 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sh3rf2Q8BZT2 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.45■□□□□ 0.06
Sh3rf2Q8BZT2 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Sh3rf2Q8BZT2 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sh3rf2Q8BZT2 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sh3rf2Q8BZT2 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sh3rf2Q8BZT2 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Sh3rf2Q8BZT2 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sh3rf2Q8BZT2 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sh3rf2Q8BZT2 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sh3rf2Q8BZT2 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sh3rf2Q8BZT2 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Sh3rf2Q8BZT2 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sh3rf2Q8BZT2 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sh3rf2Q8BZT2 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.44■□□□□ 0.06
Sh3rf2Q8BZT2 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Sh3rf2Q8BZT2 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sh3rf2Q8BZT2 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sh3rf2Q8BZT2 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.44■□□□□ 0.06
Sh3rf2Q8BZT2 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sh3rf2Q8BZT2 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sh3rf2Q8BZT2 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sh3rf2Q8BZT2 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sh3rf2Q8BZT2 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.44■□□□□ 0.06
Sh3rf2Q8BZT2 Rprl2-201ENSMUST00000157150 290 ntBASIC15.44■□□□□ 0.06
Sh3rf2Q8BZT2 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.44■□□□□ 0.06
Sh3rf2Q8BZT2 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.44■□□□□ 0.06
Sh3rf2Q8BZT2 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sh3rf2Q8BZT2 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sh3rf2Q8BZT2 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sh3rf2Q8BZT2 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sh3rf2Q8BZT2 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sh3rf2Q8BZT2 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Sh3rf2Q8BZT2 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Sh3rf2Q8BZT2 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3rf2Q8BZT2 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3rf2Q8BZT2 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3rf2Q8BZT2 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3rf2Q8BZT2 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
Sh3rf2Q8BZT2 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Sh3rf2Q8BZT2 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
Sh3rf2Q8BZT2 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3rf2Q8BZT2 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3rf2Q8BZT2 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC15.43■□□□□ 0.06
Sh3rf2Q8BZT2 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3rf2Q8BZT2 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.43■□□□□ 0.06
Sh3rf2Q8BZT2 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC15.43■□□□□ 0.06
Sh3rf2Q8BZT2 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.43■□□□□ 0.06
Sh3rf2Q8BZT2 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3rf2Q8BZT2 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3rf2Q8BZT2 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3rf2Q8BZT2 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3rf2Q8BZT2 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3rf2Q8BZT2 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Sh3rf2Q8BZT2 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3rf2Q8BZT2 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3rf2Q8BZT2 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Sh3rf2Q8BZT2 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3rf2Q8BZT2 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3rf2Q8BZT2 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC15.42■□□□□ 0.06
Sh3rf2Q8BZT2 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.42■□□□□ 0.06
Sh3rf2Q8BZT2 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3rf2Q8BZT2 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3rf2Q8BZT2 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.42■□□□□ 0.06
Sh3rf2Q8BZT2 Gm18889-201ENSMUST00000174284 929 ntBASIC15.42■□□□□ 0.06
Sh3rf2Q8BZT2 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.42■□□□□ 0.06
Sh3rf2Q8BZT2 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC15.42■□□□□ 0.06
Sh3rf2Q8BZT2 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
Sh3rf2Q8BZT2 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC15.42■□□□□ 0.06
Sh3rf2Q8BZT2 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC15.42■□□□□ 0.06
Sh3rf2Q8BZT2 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3rf2Q8BZT2 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3rf2Q8BZT2 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3rf2Q8BZT2 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3rf2Q8BZT2 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms