Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf4Q8BQZ5 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf4Q8BQZ5 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf4Q8BQZ5 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf4Q8BQZ5 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf4Q8BQZ5 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Cpsf4Q8BQZ5 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Cpsf4Q8BQZ5 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Cpsf4Q8BQZ5 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.84□□□□□ -0.03
Cpsf4Q8BQZ5 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf4Q8BQZ5 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf4Q8BQZ5 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf4Q8BQZ5 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf4Q8BQZ5 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf4Q8BQZ5 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.84□□□□□ -0.03
Cpsf4Q8BQZ5 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
Cpsf4Q8BQZ5 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.84□□□□□ -0.03
Cpsf4Q8BQZ5 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf4Q8BQZ5 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf4Q8BQZ5 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf4Q8BQZ5 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf4Q8BQZ5 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf4Q8BQZ5 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf4Q8BQZ5 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf4Q8BQZ5 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cpsf4Q8BQZ5 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cpsf4Q8BQZ5 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.83□□□□□ -0.03
Cpsf4Q8BQZ5 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cpsf4Q8BQZ5 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.03
Cpsf4Q8BQZ5 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpsf4Q8BQZ5 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Cpsf4Q8BQZ5 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Cpsf4Q8BQZ5 Gm7862-201ENSMUST00000121461 292 ntBASIC14.83□□□□□ -0.04
Cpsf4Q8BQZ5 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.83□□□□□ -0.04
Cpsf4Q8BQZ5 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.83□□□□□ -0.04
Cpsf4Q8BQZ5 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.83□□□□□ -0.04
Cpsf4Q8BQZ5 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Cpsf4Q8BQZ5 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpsf4Q8BQZ5 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpsf4Q8BQZ5 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpsf4Q8BQZ5 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpsf4Q8BQZ5 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpsf4Q8BQZ5 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Cpsf4Q8BQZ5 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cpsf4Q8BQZ5 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf4Q8BQZ5 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf4Q8BQZ5 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Cpsf4Q8BQZ5 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf4Q8BQZ5 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf4Q8BQZ5 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf4Q8BQZ5 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf4Q8BQZ5 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Cpsf4Q8BQZ5 Gm13418-201ENSMUST00000119097 944 ntBASIC14.82□□□□□ -0.04
Cpsf4Q8BQZ5 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf4Q8BQZ5 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf4Q8BQZ5 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Cpsf4Q8BQZ5 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Cpsf4Q8BQZ5 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
Cpsf4Q8BQZ5 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
Cpsf4Q8BQZ5 Gm9172-201ENSMUST00000212092 954 ntBASIC14.82□□□□□ -0.04
Cpsf4Q8BQZ5 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.82□□□□□ -0.04
Cpsf4Q8BQZ5 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf4Q8BQZ5 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf4Q8BQZ5 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf4Q8BQZ5 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Cpsf4Q8BQZ5 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.82□□□□□ -0.04
Cpsf4Q8BQZ5 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.82□□□□□ -0.04
Cpsf4Q8BQZ5 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf4Q8BQZ5 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf4Q8BQZ5 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf4Q8BQZ5 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf4Q8BQZ5 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.82□□□□□ -0.04
Cpsf4Q8BQZ5 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf4Q8BQZ5 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf4Q8BQZ5 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf4Q8BQZ5 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf4Q8BQZ5 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf4Q8BQZ5 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf4Q8BQZ5 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf4Q8BQZ5 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Cpsf4Q8BQZ5 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
Cpsf4Q8BQZ5 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf4Q8BQZ5 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
Cpsf4Q8BQZ5 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf4Q8BQZ5 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.81□□□□□ -0.04
Cpsf4Q8BQZ5 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Cpsf4Q8BQZ5 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf4Q8BQZ5 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf4Q8BQZ5 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf4Q8BQZ5 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf4Q8BQZ5 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf4Q8BQZ5 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf4Q8BQZ5 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf4Q8BQZ5 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf4Q8BQZ5 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf4Q8BQZ5 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Cpsf4Q8BQZ5 Gm8097-201ENSMUST00000117903 829 ntBASIC14.81□□□□□ -0.04
Cpsf4Q8BQZ5 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.81□□□□□ -0.04
Cpsf4Q8BQZ5 Gm12497-201ENSMUST00000138778 237 ntBASIC14.81□□□□□ -0.04
Cpsf4Q8BQZ5 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms