Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC19.81■□□□□ 0.76
Col16a1Q8BLX7 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC19.81■□□□□ 0.76
Col16a1Q8BLX7 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Col16a1Q8BLX7 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC19.81■□□□□ 0.76
Col16a1Q8BLX7 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Col16a1Q8BLX7 Dupd1-202ENSMUST00000224735 548 ntBASIC19.81■□□□□ 0.76
Col16a1Q8BLX7 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col16a1Q8BLX7 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col16a1Q8BLX7 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col16a1Q8BLX7 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Col16a1Q8BLX7 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col16a1Q8BLX7 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col16a1Q8BLX7 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col16a1Q8BLX7 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col16a1Q8BLX7 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.8■□□□□ 0.76
Col16a1Q8BLX7 Gm8242-201ENSMUST00000193029 1420 ntBASIC19.8■□□□□ 0.76
Col16a1Q8BLX7 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC19.8■□□□□ 0.76
Col16a1Q8BLX7 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col16a1Q8BLX7 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Col16a1Q8BLX7 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col16a1Q8BLX7 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Col16a1Q8BLX7 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC19.8■□□□□ 0.76
Col16a1Q8BLX7 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC19.8■□□□□ 0.76
Col16a1Q8BLX7 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Col16a1Q8BLX7 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC19.8■□□□□ 0.76
Col16a1Q8BLX7 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col16a1Q8BLX7 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col16a1Q8BLX7 Gm45195-201ENSMUST00000205597 1008 ntBASIC19.8■□□□□ 0.76
Col16a1Q8BLX7 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col16a1Q8BLX7 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col16a1Q8BLX7 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col16a1Q8BLX7 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col16a1Q8BLX7 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col16a1Q8BLX7 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col16a1Q8BLX7 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
Col16a1Q8BLX7 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC19.79■□□□□ 0.76
Col16a1Q8BLX7 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col16a1Q8BLX7 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Col16a1Q8BLX7 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Col16a1Q8BLX7 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col16a1Q8BLX7 AC163637.1-201ENSMUST00000215491 1894 ntBASIC19.79■□□□□ 0.76
Col16a1Q8BLX7 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col16a1Q8BLX7 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col16a1Q8BLX7 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col16a1Q8BLX7 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Col16a1Q8BLX7 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Col16a1Q8BLX7 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC19.78■□□□□ 0.76
Col16a1Q8BLX7 Cd63-ps-201ENSMUST00000145417 875 ntBASIC19.78■□□□□ 0.76
Col16a1Q8BLX7 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC19.78■□□□□ 0.76
Col16a1Q8BLX7 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col16a1Q8BLX7 Gm44719-201ENSMUST00000206404 149 ntBASIC19.78■□□□□ 0.76
Col16a1Q8BLX7 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC19.78■□□□□ 0.76
Col16a1Q8BLX7 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Col16a1Q8BLX7 Gm16476-201ENSMUST00000221544 139 ntBASIC19.78■□□□□ 0.76
Col16a1Q8BLX7 Mxra8os-201ENSMUST00000097740 687 ntBASIC19.78■□□□□ 0.76
Col16a1Q8BLX7 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col16a1Q8BLX7 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Col16a1Q8BLX7 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col16a1Q8BLX7 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col16a1Q8BLX7 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Col16a1Q8BLX7 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col16a1Q8BLX7 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col16a1Q8BLX7 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col16a1Q8BLX7 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col16a1Q8BLX7 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC19.78■□□□□ 0.76
Col16a1Q8BLX7 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Col16a1Q8BLX7 Ighv5-13-201ENSMUST00000193550 290 ntBASIC19.78■□□□□ 0.76
Col16a1Q8BLX7 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Col16a1Q8BLX7 Gm42612-201ENSMUST00000197986 623 ntBASIC19.78■□□□□ 0.76
Col16a1Q8BLX7 Gm43170-201ENSMUST00000199827 612 ntBASIC19.78■□□□□ 0.76
Col16a1Q8BLX7 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Col16a1Q8BLX7 Gm10313-201ENSMUST00000095320 1002 ntBASIC19.78■□□□□ 0.76
Col16a1Q8BLX7 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col16a1Q8BLX7 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col16a1Q8BLX7 Gm6756-201ENSMUST00000180647 1620 ntBASIC19.77■□□□□ 0.76
Col16a1Q8BLX7 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col16a1Q8BLX7 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Col16a1Q8BLX7 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col16a1Q8BLX7 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC19.77■□□□□ 0.76
Col16a1Q8BLX7 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Col16a1Q8BLX7 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col16a1Q8BLX7 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC19.77■□□□□ 0.76
Col16a1Q8BLX7 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Col16a1Q8BLX7 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC19.77■□□□□ 0.76
Col16a1Q8BLX7 Gm45668-201ENSMUST00000211271 493 ntBASIC19.77■□□□□ 0.76
Col16a1Q8BLX7 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col16a1Q8BLX7 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Col16a1Q8BLX7 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Col16a1Q8BLX7 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
Col16a1Q8BLX7 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Col16a1Q8BLX7 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col16a1Q8BLX7 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col16a1Q8BLX7 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col16a1Q8BLX7 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col16a1Q8BLX7 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col16a1Q8BLX7 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
Col16a1Q8BLX7 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC19.76■□□□□ 0.75
Col16a1Q8BLX7 Gm45384-201ENSMUST00000210451 277 ntBASIC19.76■□□□□ 0.75
Col16a1Q8BLX7 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col16a1Q8BLX7 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms