Protein–RNA interactions for Protein: Q8BLA8

Trpa1, Transient receptor potential cation channel subfamily A member 1, mousemouse

Predictions only

Length 1,125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpa1Q8BLA8 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trpa1Q8BLA8 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trpa1Q8BLA8 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trpa1Q8BLA8 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trpa1Q8BLA8 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trpa1Q8BLA8 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trpa1Q8BLA8 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trpa1Q8BLA8 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Trpa1Q8BLA8 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trpa1Q8BLA8 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Trpa1Q8BLA8 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.08■□□□□ 0.16
Trpa1Q8BLA8 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trpa1Q8BLA8 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trpa1Q8BLA8 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trpa1Q8BLA8 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trpa1Q8BLA8 Gm6550-201ENSMUST00000187574 993 ntBASIC16.08■□□□□ 0.16
Trpa1Q8BLA8 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.08■□□□□ 0.16
Trpa1Q8BLA8 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.08■□□□□ 0.16
Trpa1Q8BLA8 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trpa1Q8BLA8 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trpa1Q8BLA8 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.08■□□□□ 0.16
Trpa1Q8BLA8 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trpa1Q8BLA8 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trpa1Q8BLA8 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trpa1Q8BLA8 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trpa1Q8BLA8 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trpa1Q8BLA8 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.08■□□□□ 0.16
Trpa1Q8BLA8 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trpa1Q8BLA8 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trpa1Q8BLA8 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trpa1Q8BLA8 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trpa1Q8BLA8 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trpa1Q8BLA8 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trpa1Q8BLA8 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trpa1Q8BLA8 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trpa1Q8BLA8 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trpa1Q8BLA8 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trpa1Q8BLA8 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trpa1Q8BLA8 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trpa1Q8BLA8 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trpa1Q8BLA8 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trpa1Q8BLA8 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trpa1Q8BLA8 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trpa1Q8BLA8 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Trpa1Q8BLA8 Gm18733-201ENSMUST00000173950 856 ntBASIC16.07■□□□□ 0.16
Trpa1Q8BLA8 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.07■□□□□ 0.16
Trpa1Q8BLA8 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trpa1Q8BLA8 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.07■□□□□ 0.16
Trpa1Q8BLA8 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.07■□□□□ 0.16
Trpa1Q8BLA8 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trpa1Q8BLA8 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trpa1Q8BLA8 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Trpa1Q8BLA8 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trpa1Q8BLA8 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trpa1Q8BLA8 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trpa1Q8BLA8 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trpa1Q8BLA8 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trpa1Q8BLA8 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trpa1Q8BLA8 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trpa1Q8BLA8 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trpa1Q8BLA8 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trpa1Q8BLA8 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trpa1Q8BLA8 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trpa1Q8BLA8 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trpa1Q8BLA8 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.07■□□□□ 0.16
Trpa1Q8BLA8 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.07■□□□□ 0.16
Trpa1Q8BLA8 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trpa1Q8BLA8 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trpa1Q8BLA8 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
Trpa1Q8BLA8 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trpa1Q8BLA8 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trpa1Q8BLA8 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trpa1Q8BLA8 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trpa1Q8BLA8 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trpa1Q8BLA8 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trpa1Q8BLA8 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Trpa1Q8BLA8 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trpa1Q8BLA8 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Trpa1Q8BLA8 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.06■□□□□ 0.16
Trpa1Q8BLA8 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trpa1Q8BLA8 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.06■□□□□ 0.16
Trpa1Q8BLA8 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Trpa1Q8BLA8 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Trpa1Q8BLA8 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trpa1Q8BLA8 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trpa1Q8BLA8 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trpa1Q8BLA8 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Trpa1Q8BLA8 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trpa1Q8BLA8 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trpa1Q8BLA8 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trpa1Q8BLA8 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trpa1Q8BLA8 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trpa1Q8BLA8 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Trpa1Q8BLA8 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trpa1Q8BLA8 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trpa1Q8BLA8 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trpa1Q8BLA8 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trpa1Q8BLA8 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trpa1Q8BLA8 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trpa1Q8BLA8 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms